Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3073 ATGGTGAGGATGGGGAATGGTGTAATAGGACTTGTGATGGCCATTGTCACGATGATGAATATTGTGAGTGGCCAAAGCGATGTCTCGGTGGCAGACATCGTGACGCCAGAGTTCTTCAACGGGATAATTGATCAGGCAGATGCTAGTTGTGCAGGGAAGAACTTCTACTCACGAGATGCTTTCCTCACTGCTCTCAATTCCTATAATCAGTTTGGTAAGCTTGATACCCTGGATGACTCCAAGCGCGAGATTGCTGCTGCTTTTGCTCATTTCACCCACGAAACCGGACACTTTTGCTACATAGAAGAGATAGATGGTGCATCAAAGGACTACTGCGATGAAACCAACACACAATACCCATGCAACCCAGACAAAGGGTACTACGGGCGTGGACCAATTCAACTATCATGGAACTTTAACTACGGACCAGCAGGCCAAGACATTGGTTTTGATGGGTTGAACGCTCCTGAGACAGTGGCCAATGACGTTGTTGTGTCCTTCAAGACGGCATTGTGGTACTGGATGGAGAATGTTCGCCCTGTGGTCAACCAGGGCTTTGGTGCAACCATCAGAGCCATCAATGGCCAGCTTGAGTGTGATGGTGCTAACCCCACCACGGTTCAGGCTCGGGTTAATTACTACGAAGATTACTGTTCACAATTTGGTGTTGACCCTGGTGATAACCTTACTTGCTAG 696 0.4813 MVRMGNGVIGLVMAIVTMMNIVSGQSDVSVADIVTPEFFNGIIDQADASCAGKNFYSRDAFLTALNSYNQFGKLDTLDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDETNTQYPCNPDKGYYGRGPIQLSWNFNYGPAGQDIGFDGLNAPETVANDVVVSFKTALWYWMENVRPVVNQGFGATIRAINGQLECDGANPTTVQARVNYYEDYCSQFGVDPGDNLTC* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3073 231 CDD chitinase_GH19 34 231 - -
Dod03g3073 231 ProSitePatterns Chitinases family 19 signature 2. 165 175 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod03g3073 231 Gene3D - 28 231 - -
Dod03g3073 231 ProSitePatterns Chitinases family 19 signature 1. 50 72 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod03g3073 231 SUPERFAMILY Lysozyme-like 29 231 IPR023346 -
Dod03g3073 231 Gene3D Endochitinase, domain 2 104 161 - -
Dod03g3073 231 PIRSF Endochitinase 6 231 IPR016283 GO:0004568|GO:0005975
Dod03g3073 231 Pfam Chitinase class I 184 231 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod03g3073 231 Pfam Chitinase class I 33 178 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod03g3073 231 PANTHER ENDOCHITINASE EP3-LIKE 11 231 - -
Dod03g3073 231 PANTHER CHITINASE-RELATED 11 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3073 Dod-Chr3 63427388 63428908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3073 28 231 Glycoside Hydrolase AT3G54420 79.412 8.06e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3073 K01183 - zju:107406019 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1851 10 39917826 39919157 Dod03g3073 03 63427388 63428908 PCT