Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1846 ATGAAGAAGAACAACGAGGACAACACCAAGAACCAACAGAACAACAAAGACTCTGCTGCTGCTGCTGCTGCCGTAGGAATCTTAGATTCCCGATTCAATCAGACCCTCCGGAATGTTCAAGGGTTACTCAAGGGTCGTAGCATACCTGGCAAGATATTACTGAGCCAGAGGGTAGACCTGCCAGACCCAAATTTATACTCGCCAACTTACGAAAGGAGCTCGTCATTCCGTGATACTGGCACAAGTGATCACACATCTGAGACAGTAGAGGAGGAAGCTCGCAGTACTAGCAAACCCATTGGTACATCCAATGAGAAGATGTTGAAAGTATCAACCTCCCATGTAGAGAACCCTTCTGAAGAAGTGCAGAAATCTTCCGTAGGTGCTAGAGCTACAGATTCTGGAAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGAACAATGGTTATATTAGAGAAGTTGCGTGAGTTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTATGGAGACTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGCCTAGAGTATCTTGACTGTGTTTCTCAGTGTTATGATATTCCCGATACAGAACGCTCAGATGATGAGATCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTCCATTTTTCCAGCAACAGCAAGTCCAGAAGTCACTGGAGCGTATTCTTTACACATGGGCTATTCGGCATCCTGCCAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTAGTTGTTTTCCTATCAGAACACTTAGAAGGGGGTATAGAAAATTGGTCAATGTCTGATTTATCTTCAGATAAAATTTCTAACATAGAGGCTGATTGCTATTGGTGCTTGTCAAAGTTACTGGATGGTATGCAAGACCATTACACGTTTGCTCAACCAGGAATTCAAAGGCTTGTCTTTAAATTGAAGGAATTGGTCAGGAGGATTGATGAGCCTGTTTCAAGCCATATGGAGCATCAGGGACTGGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGTGAGATACCCTTTCATCTTGTCACACGCCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCCAGCTTTCTTCTGACGTGGTCAGACAAGCTCCAGAAGCTTGATTTCCAGGAGTTAGTAATGTTCCTTCAACACCTTCCAACACACAACTGGACTCACCAGGAGCTCGAAATGGTGCTTTCCCGTGCATTTATGTGGCATAGCATGTTCAACAACTCTCCTAGCCATTTAGCCACCTGA 1377 0.4401 MKKNNEDNTKNQQNNKDSAAAAAAVGILDSRFNQTLRNVQGLLKGRSIPGKILLSQRVDLPDPNLYSPTYERSSSFRDTGTSDHTSETVEEEARSTSKPIGTSNEKMLKVSTSHVENPSEEVQKSSVGARATDSGRVMKFTKVLSGTMVILEKLRELAWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQCYDIPDTERSDDEINMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEHLEGGIENWSMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSSHMEHQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTHNWTHQELEMVLSRAFMWHSMFNNSPSHLAT* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1846 458 MobiDBLite consensus disorder prediction 63 102 - -
Dod10g1846 458 SMART tbc_4 158 414 IPR000195 -
Dod10g1846 458 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 10 455 - -
Dod10g1846 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 324 446 IPR035969 -
Dod10g1846 458 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 10 455 - -
Dod10g1846 458 Pfam Rab-GTPase-TBC domain 165 409 IPR000195 -
Dod10g1846 458 MobiDBLite consensus disorder prediction 67 82 - -
Dod10g1846 458 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 201 322 - -
Dod10g1846 458 Gene3D - 323 458 - -
Dod10g1846 458 Gene3D - 138 189 - -
Dod10g1846 458 ProSiteProfiles TBC/rab GAP domain profile. 161 388 IPR000195 -
Dod10g1846 458 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 140 348 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1846 Dod-Chr10 39895426 39900453 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1846 K20360 - gmx:100785695 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1846 10 39895426 39900453 Dod10g1846 10 39895426 39900453 ECH
Dod10g1846 10 39895426 39900453 Dod03g3066 03 63379459 63385268 PCT