Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3066 ATGAACAACAACAACATCCACAACGACAACAATCGCCAACAACAAGAAGATCAGCGTAAAATCGTTGACTCCAGATTCAATCAAACCCTCAGAACTGTTCAAGGGTTACTCAAAGGTCGTAGCATGCCTGGGAAAATATTATTGAGCCGGCGATCAGACCTGGTAGATAACTCAAACTCCAAGGAATCATTGCCAAATTACAAAAGGAGCTTCTCACACAATGATGCTGGCACAAGTGATCACGCATATGGGGCAGTAGAGGAGGAAGTTCAGAGTACGAGCAAACCAACTAGTATTGTCAATTTGAACAAGTTAAAAATATCAACCTCCTTTGTAGAGAGACCATCTGAAGAAGTCCGCAAGTCTACCATGGGTGCCAGAGCCACAGATTCTGCAAGAGTTACGAAGTTCACTAAGGTGCTTTCCGGGACAATGGTTATATTAGACAAGTTGCGTGAGCTATCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAAGGAGGGAGTTCTAAGAAGGAAGCGCCTTGAGTACTTTGACTGTATTTCTCAGTATTATGAAATTCCTGATACAGACCATTCAGATGATGAGGTCAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTCCATTCTTCCAGCAACAACAAGTTCAGAAATCATTGGAGCGTATTCTTTACGCATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTTACACCATTTTTAGTTGTTTTCCTATCAGAGTACTTGGAAGGGGGTATAGATAATTGGTCAATGTCTGATTTATCTTCAGAGGAAATCTGCAATATAGAGGCTGACTGCTATTGGTGCTTGTCAAAGCTGCTTGATGGCATGCAAGATCATTACACATTTGCTCAACCAGGAATTCAGAGACTTGTTTTTAAGTTGAAGGAATTGGTCACAAGGATTGATGAGCCTGTTTCACGGCATATTGAGGATCAGGGACTTGAGTTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGTGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATACCTTGCTGAAGGAGATGCTTTACCAGACTTCCTAGTGTATATATCTGCCAGTTTCCTTCTATCGTGGTCAGATAAGCTCCAGAAGCTTGATTTCCAAGAGTTGGTAATGTTCCTTCAGCGCCTTCCAACTCAGAACTGGACGCACCAGGAGCTCGAGATGGTTCTTTCCCGTGCATTTATGTGGCACAGCATGTTCAACAACTCCCCGAGCCATTTAGCTAGCTGA 1368 0.4349 MNNNNIHNDNNRQQQEDQRKIVDSRFNQTLRTVQGLLKGRSMPGKILLSRRSDLVDNSNSKESLPNYKRSFSHNDAGTSDHAYGAVEEEVQSTSKPTSIVNLNKLKISTSFVERPSEEVRKSTMGARATDSARVTKFTKVLSGTMVILDKLRELSWSGVPDYMRPTVWRLLLGYAPPNSDRKEGVLRRKRLEYFDCISQYYEIPDTDHSDDEVNMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWSMSDLSSEEICNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVTRIDEPVSRHIEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYISASFLLSWSDKLQKLDFQELVMFLQRLPTQNWTHQELEMVLSRAFMWHSMFNNSPSHLAS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3066 455 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 452 - -
Dod03g3066 455 PANTHER GTPASE-ACTIVATING PROTEIN GYP1-LIKE 2 452 - -
Dod03g3066 455 MobiDBLite consensus disorder prediction 53 77 - -
Dod03g3066 455 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 195 319 - -
Dod03g3066 455 SMART tbc_4 155 411 IPR000195 -
Dod03g3066 455 ProSiteProfiles TBC/rab GAP domain profile. 158 385 IPR000195 -
Dod03g3066 455 Gene3D - 320 455 - -
Dod03g3066 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 137 345 IPR035969 -
Dod03g3066 455 MobiDBLite consensus disorder prediction 53 79 - -
Dod03g3066 455 Gene3D - 135 186 - -
Dod03g3066 455 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 321 443 IPR035969 -
Dod03g3066 455 Pfam Rab-GTPase-TBC domain 162 407 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3066 Dod-Chr3 63379459 63385268 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3066 K20360 - gmx:100819281 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1846 10 39895426 39900453 Dod03g3066 03 63379459 63385268 PCT