Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod10g1840 | ATGGCGAACCCTTCTGGGAACAACCAGGAACAGACCCATGTGTCTTCTTCGCTGAACGGGAACAACTCGGAGGCTTCAGCTTCAGCTTCAGCTCTCGCCATGAAGCACAACCCTGGAATCTCCCTCGATTGGACCCCCGAAGAGCAGGCCACTCTCGAAGAAGGACTCTCTAAGCATGCCTCGGAATCTAACATAGTGCGCTATGCAAAGATAGCCCTGCAGCTACAGAGTAAGACAGTCCGAGATGTAGCACTGCGTGTTAGATGGATGAATAAGAAAGAAAATAGCAAGAGAAGGAAGGAGGATCACAATTTAACAAGAAAAAGCAAAGAGAAAAAGGAACGAGTTTCTGATGCTGCAGCAAAGTCATCTCACTTTGCTGCTCGGTCCAATGTTCCTCCATATGCTCCTCCAATGATTACAATAGACAATGATGATGGTATCCCTTATACAGCTATTGGAGGTCCCACTGGTGAGCTATTGGAACAAAACGCACAGGCATTGAATCAAATCTCTGCAAATCTTTCTGCTTTTCTGATACAGGACAACATCAATCTTTTCTGTCAAACTAGAGACAACATCCTTAAAATTATGAACGAGTTGAATGATTCGCCGGAAGTGATGAAGCAAATGCCGCCCCTTCCTGTGAAGGTGAATGAAGATCTAGCTAATTCCATACTTCCAAGAACAACTCTCTCAACACAGTCATGA | 711 | 0.4501 | MANPSGNNQEQTHVSSSLNGNNSEASASASALAMKHNPGISLDWTPEEQATLEEGLSKHASESNIVRYAKIALQLQSKTVRDVALRVRWMNKKENSKRRKEDHNLTRKSKEKKERVSDAAAKSSHFAARSNVPPYAPPMITIDNDDGIPYTAIGGPTGELLEQNAQALNQISANLSAFLIQDNINLFCQTRDNILKIMNELNDSPEVMKQMPPLPVKVNEDLANSILPRTTLSTQS* | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod10g1840 | 236 | MobiDBLite | consensus disorder prediction | 94 | 137 | - | - | |
| Dod10g1840 | 236 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Dod10g1840 | 236 | MobiDBLite | consensus disorder prediction | 94 | 120 | - | - | |
| Dod10g1840 | 236 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
| Dod10g1840 | 236 | CDD | SANT | 44 | 93 | IPR001005 | - | |
| Dod10g1840 | 236 | Gene3D | - | 44 | 119 | - | - | |
| Dod10g1840 | 236 | PANTHER | BNAC03G35350D PROTEIN | 11 | 231 | - | - | |
| Dod10g1840 | 236 | Pfam | Protein of unknown function (DUF3755) | 180 | 210 | IPR022228 | - | |
| Dod10g1840 | 236 | PANTHER | FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED | 11 | 231 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod10g1840 | Dod-Chr10 | 39853618 | 39857785 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod10g1840 | - | - | gmx:100819879 | 384.8 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod10g1840 | 10 | 39853618 | 39857785 | Dod03g3058 | 03 | 63315229 | 63318836 | PCT |