Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3058 ATGGCTAACTTTAACGCTTCGGGTAACAACGATCATCACATGGTGAACAACAATGGTGAACAACGATCATCATCTTCATCTTCCTTCAGCGGGAACAACGGGAACCCTTTGGCTTCAGCTCCTCCTGCTCCTTCTCCTCGTTCGGCCTCAGAGCTACCCATGAGGCACAATCCTCGCCGCATATCACTGGAATGGACCCGTGAAGAACAACATGCTCTTGAAGCTTTGCTCGTTAGGCACGGCAAAGAACCTGTTGTAACACGCTATGCATTGATAGCCATAGAATTGGAGAAGAAGTCAATCCGGGATGTGGCATTGCGAGTCAGATGGATGAGAAAGAAAGAAAATGGCAACTTTGGCAAGAGGAGGAAGGATGATGTTAAGTTGGCACGAGAAAGTAAAGATAAAAAGGAAGCAACTTCATCTCTTTTTGCTGCTCAACCCTCTATAGCAGTGTCATCTCACTTTGCTGCTGAACCCCCTTCAGCAATGCCATCTCTCATTGCTGCTCAACCCCACGGAGTAGTGCCATCTCACTTTGCTGCTCTGCCCCCTGCAGCCAGGCCATCTCTCTTTGCTGCTCGACCCCATGTGGCAGTGCCATCTCACTTTGCTCCTCAACCCCCTGCAGCAAGGCCATCTCTCTTTGCTGCTCGACCCCCTACTGCAGTGCCATCTCACATTGTTGCTCGACCTCCTGCAACAATGCCATCTCACTTTGCTGCTCGGCCCAACACTTACCACCTTGTGCCGGGAATGGCTACGATGAACATTGATGATGGCATCTCTTACGGTGCAACTGAAGGTGTGATTAATGAGAAACTAGAGCAAAATGATCAGGCCTTGAGACAAATCTCAAGAAATCTTGCTTCTTTTCAGGTCCAGGGGTGCATCAAACTTTTCTGCCAAACACGGCGGAACCTCGTTAACATTATGAATGAATTGAACGGCATGGATTTGATGATGCAAATGCCACCCCTTCCTCTTAAGCTGGATGAGATCCCCATACTTCCCGAGACAGAGTCAGCTCCTCTCGGGTGTGGGACACAGCTTATCACCTAA 1062 0.4915 MANFNASGNNDHHMVNNNGEQRSSSSSSFSGNNGNPLASAPPAPSPRSASELPMRHNPRRISLEWTREEQHALEALLVRHGKEPVVTRYALIAIELEKKSIRDVALRVRWMRKKENGNFGKRRKDDVKLARESKDKKEATSSLFAAQPSIAVSSHFAAEPPSAMPSLIAAQPHGVVPSHFAALPPAARPSLFAARPHVAVPSHFAPQPPAARPSLFAARPPTAVPSHIVARPPATMPSHFAARPNTYHLVPGMATMNIDDGISYGATEGVINEKLEQNDQALRQISRNLASFQVQGCIKLFCQTRRNLVNIMNELNGMDLMMQMPPLPLKLDEIPILPETESAPLGCGTQLIT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3058 353 CDD SANT 64 114 IPR001005 -
Dod03g3058 353 PANTHER HISTONE H2A DEUBIQUITINASE (DUF3755) 48 333 - -
Dod03g3058 353 MobiDBLite consensus disorder prediction 118 139 - -
Dod03g3058 353 MobiDBLite consensus disorder prediction 1 38 - -
Dod03g3058 353 Pfam Protein of unknown function (DUF3755) 291 322 IPR022228 -
Dod03g3058 353 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 48 333 - -
Dod03g3058 353 MobiDBLite consensus disorder prediction 1 55 - -
Dod03g3058 353 MobiDBLite consensus disorder prediction 118 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3058 Dod-Chr3 63315229 63318836 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3058 - - cam:101498979 112.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1840 10 39853618 39857785 Dod03g3058 03 63315229 63318836 PCT