Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1798 ATGCATAAGCCACCACAGCCCCTAGAATTTGCTGTCAAGGAGATCAAGCCCAACATTGGAGCAGGGATAATGACATGGGACAAACTATCCTGCACCCATGACCTGGTTGAACAGATGCAGTACCTCTATGTTCGTGTCGTGAAAGCCAAGGATTTTCCTGGGAAGGATGTCACTGGTAGTGTTGATCCCTACGTTGAAGTGAAGCTTGGAAACTACAAGGGCCTTACCAAGCATTTTGAGAAGAAGTCCAATCCTGAGTGGAATCAGGTTTATGCCTTCTCCAAAGACAGGATTCAAGCTTCTGTTTTGGAGTTGGTTGTCAAAGATAAGGATGTTGTTGTGGATGGCTTTGTAGGGAGAGTGCTGTTTGATCTGAGTGATATCCCAAAACGAGTTCCCCCAGATAGCCCATTGGCTCCACAGTGGTACAGGCTGGAAGATAGGAGAGGTGACAAAGCCAAGGGAGAGCTAATGCTGGCAGTTTGGATTGGAACTCAAGCTGATGAGGCATTTCCTGATGCATGGCATTCTGATGCAGCAACTGTTCGTCCTGAAGCAGTTGCAAGCATAAGATCAAAGGTTTACCTTTCACCTAAGCTTTGGTATGTCAGGGTCAATGTTATTGAAGCTCAGGATTTGATCCCAAATGATAAGAGCCGGCATCCTGAAGTTTTTGTCAAGGTTAATCTGGGTAGTCAGTCTTTAAGAACTGGAATATCTCAAACTAAAACCATAAATCCTATGTGGAATGAGGATTTGATGTTTGTTGTTGCTGAGCCATTTGAGGAGCCCTTAGTTCTGAATGTGGAAGACAGGGTTGGACCAAACAAAGATGAAGTCCTGGGAAGGTGTGTGATTCCTTTACATAGTGTGCAAAGGAGGTTGGATCACAAGCCTGTGAATATGAGGTGGTTTAATCTTGAGAAGCATGTGGTTATTGAAGGGGAACAGAAGAAAGAGACCAAATTTGCAAGTAGGATACATTTGAGGGTCTGCTTGGATGGCGGGTACCATGTGTTGGATGAGTCAACACATTACAGTAGTGATCTAAGGCCAACTGCTAAGCAACTGTGGAAGACCAGCATTGGAGTTCTGGAAGTGGGGATTATCAGTGCACAAGGGCTTATGCCAATGAAGGCAAGAGATGGGCGAGGAACCACAGATGCTTACTGTGTAGCTAAATATGGGCAGAAGTGGATCCGAACTAGGACAGTTGTAGATAGCTTTGCTCCAAAGTGGAATGAGCAGTACACTTGGGAAGTTTTTGATCCATGTACTGTTATTACAGTAGGGGTCTTTGACAGTGGTCAGGTACAAGGGGGAGACAAATCCGGTGGATCAAAGGATTCAAGAATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAACTGATAGGGCTTACACCCACTCTTATCCTCTTTTAGTATTCCCTGGTTCGAGTGTGAAGAAAATGGGAGAAGTGCAGTTGGCTGTAAGGTTCACAAGCTCATCTTTGGTAAATATGTTGAGCATGTATTCACAGCCATTGTTGCCAAAGATGCACTACATCCATCCTCTATCTGTGGTTCAGCAGGACAGTCTTAGGCATCAGGCCATGCAGATAGTGTCAATGAGGTTAAGCCGAGTTGAACCACCGCTGAGGAAAGAAGCTGTGGAATACATGCTAGATGTTGATTCACATATGTGA 1689 0.4488 MHKPPQPLEFAVKEIKPNIGAGIMTWDKLSCTHDLVEQMQYLYVRVVKAKDFPGKDVTGSVDPYVEVKLGNYKGLTKHFEKKSNPEWNQVYAFSKDRIQASVLELVVKDKDVVVDGFVGRVLFDLSDIPKRVPPDSPLAPQWYRLEDRRGDKAKGELMLAVWIGTQADEAFPDAWHSDAATVRPEAVASIRSKVYLSPKLWYVRVNVIEAQDLIPNDKSRHPEVFVKVNLGSQSLRTGISQTKTINPMWNEDLMFVVAEPFEEPLVLNVEDRVGPNKDEVLGRCVIPLHSVQRRLDHKPVNMRWFNLEKHVVIEGEQKKETKFASRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKTSIGVLEVGIISAQGLMPMKARDGRGTTDAYCVAKYGQKWIRTRTVVDSFAPKWNEQYTWEVFDPCTVITVGVFDSGQVQGGDKSGGSKDSRIGKVRIRLSTLETDRAYTHSYPLLVFPGSSVKKMGEVQLAVRFTSSSLVNMLSMYSQPLLPKMHYIHPLSVVQQDSLRHQAMQIVSMRLSRVEPPLRKEAVEYMLDVDSHM* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1798 562 SMART C2_3c 364 471 IPR000008 -
Dod10g1798 562 SMART C2_3c 202 300 IPR000008 -
Dod10g1798 562 SMART C2_3c 41 137 IPR000008 -
Dod10g1798 562 CDD C2B_MCTP_PRT_plant 41 165 - -
Dod10g1798 562 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 363 500 IPR035892 -
Dod10g1798 562 Pfam C2 domain 41 134 IPR000008 -
Dod10g1798 562 Pfam C2 domain 201 307 IPR000008 -
Dod10g1798 562 Pfam C2 domain 363 474 IPR000008 -
Dod10g1798 562 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 6 562 - -
Dod10g1798 562 CDD C2C_MCTP_PRT_plant 202 352 - -
Dod10g1798 562 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 354 IPR035892 -
Dod10g1798 562 Gene3D C2 domain 348 497 IPR035892 -
Dod10g1798 562 Gene3D C2 domain 187 333 IPR035892 -
Dod10g1798 562 Gene3D C2 domain 29 163 IPR035892 -
Dod10g1798 562 ProSiteProfiles C2 domain profile. 182 305 IPR000008 -
Dod10g1798 562 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Dod10g1798 562 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 6 562 - -
Dod10g1798 562 ProSiteProfiles C2 domain profile. 346 472 IPR000008 -
Dod10g1798 562 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 179 IPR035892 -
Dod10g1798 562 CDD C2D_MCTP_PRT_plant 364 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1798 Dod-Chr10 39177915 39179891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1798 1 562 Lipid Metabolism Gene Families AT3G57880 77.975 0.0 938
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1798 - - gmx:100809753 979.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1798 10 39177915 39179891 Dod03g3017 03 62527513 62530952 PCT