Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3017 ATGCAGAAGCCACCACAGGCAGTTGATTTTGCCCTAAAGGAGACCTCACCCAAGATAGGTGCAGGGGCAATAACAGGTGACAAACTATCATGCACCTATGACCTTGTTGAACAGATGCAATACCTCTATGTTAGAGTGGTCAAAGCCAAGGACTTGCCTTCAAAGGATGTCACTGGTAGTCTTGATCCCTATGTTGAAGTGAAGCTTGGGAACTACAAAGGACTCACCAAGCACTTTGAGAAGAAGTCCAATCCTGAGTGGAACCAGGTCTTTGCATTCTCCAAAGAAAGGATTCAAGCCTCAGTTTTGGAGGTTGTTGTCAAGGACAAGGATGTTGTTGTTGATGACTTTGTAGGGAGGGTGTGGTTTGATCTGAATGAGATCCCAAAACGTGTCCCTCCAGATAGCCCTTTGGCTCCACAGTGGTATAGGTTGGAAGATAGGAAAGGGGAAAAGGCTAAGGGAGAGTTGATGCTTGCAGTTTGGATAGGGACTCAAGCAGACGAGGCATTTGCTGATTCATGGCATTCTGATGCAGCAATGGTTGGCCCTGAAGCTGTTTCAAACATAAGATCAAAAGTTTACCTCTCACCAAAGCTTTGGTATGTGAGGGTCAATGTGATTGAAGCTCAGGACTTGGTACCTAATGACAAAAGCCGGTATCCTGAAGTATTTGTGAAGGTTAATCTAGGGAATCAGATTTTGAGGACTAGAGTGTCTCAAAGCAAGACACTAAATCCTATGTGGAATGAGGACTTGATGTTTGTTGCTGCTGAGCCATTTGAAGAACCTTTGGTTTTGACAGTGGAAGACAGGGTCGGTCCGAACAAAGATGAAATCCTTGGAAGGTGTTTGATTCCTTTGCAGATGGTGCAAAGGAGGCTAGACCACAAGCCTGTGAACACCAGGTGGTACAATCTTGAGAAGCATGTGATTGTTGAAGGGGAGAAGAAGGAGACCAAGTTTGCAAGCAGGATACATTTGAGGGTGTGCTTGGATGGAGGGTACCATGTGTTGGATGAGTCAACTCAGTACAGTAGTGATCTTAGGCCTACTGCAAAGCAGCTTTGGAAGCCAAGCATTGGGATACTTGAAGTGGGGATCATAAATGCACAAGGGCTTATGCCAATGAAGACAAGAGAAGGTAGAGGAACCACAGATGCTTATTGTGTAGCTAAATATGGCCAAAAATGGATCCGCACTAGGACAATTGTAGATAGCTCTGTTCCAAAGTGGAATGAGCAATACACTTGGGAAGTTTTTGATCTATCTACTGTTATTACAGTAGGGGTCTTTGATAATGGTCATTTGCAAGGTGGAGACAAATCTGGTGGATCAAAGGATTCTAGGATAGGGAAGGTGAGAATTAGGCTATCCACTCTTGAAGCTGATAGAGTCTACACACACTCTTACCCTCTTTTGGTTCTGCATACCTCTGGAGTGAAGAAAACTGGAGAATTGCAATTGGCTGTCAGGTTCACTAGCTCATCTTTCATCAACATTTTGTATTTGTATTCCCAGCCATTGTTGCCAAAGATGCACTACATCCACCCTCTATCTGTGATTCAGCTAGACAATCTAAGGCATAAGGCCATTCAAATTGTGTCAATGAGGTTGAGCCGGGCTGAGCCGCCGCTAAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACATATGTGGAGCATGAGAAGGAGCAAAGCTAATTTCTTCAGAATAATGAAAGTACTAGGTGGGTTGATAGCCTTTGGGAGGTGGTTTGATCAAATATGCAACTGGAGAAACCCCATCACAACCATACTAATCCATATCCTTTTCATAATATTGGTTCTCTATCCAGAGCTAATACTCCCCACAATCTTCTTGTACCTGTTCTTGATTGGAATTTGGAACTTCAGATGGAGGCCAAGACACCCTCCACACATGGACACTAGATTGTCTCATGCTGATGCTGCTCACCCTGATGAATTAGATGAAGAGTTTGACTCATTCCCAACTTCAAGGTCATCAGATATGGTTAGGATGAGGTATGATCGCTTAAGAAGCATTGCAGGGAAAGTCCAAACTGTTGTAGGTGACTTGGCTACACAAGGAGAAAGGTTCCAAAGTCTACTAAGTTGGAGAGATCCAAGGGCAACCGCTTTGTTTGTGACATTCTGTTTCTTTGCTGCTATAGTTCTTTATGTTACTCCCTTTCAGGTTGTGGCCCTTCTCACTGGCTTCTATGTGCTGAGGCACCCCAGATTCCGCCACAAACTTCCATCAGTTCCAATCAACTTCTTTAGAAGATTGCCAGCCAGATCAGATAGCATGTTGTAA 2322 0.4406 MQKPPQAVDFALKETSPKIGAGAITGDKLSCTYDLVEQMQYLYVRVVKAKDLPSKDVTGSLDPYVEVKLGNYKGLTKHFEKKSNPEWNQVFAFSKERIQASVLEVVVKDKDVVVDDFVGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKGEKAKGELMLAVWIGTQADEAFADSWHSDAAMVGPEAVSNIRSKVYLSPKLWYVRVNVIEAQDLVPNDKSRYPEVFVKVNLGNQILRTRVSQSKTLNPMWNEDLMFVAAEPFEEPLVLTVEDRVGPNKDEILGRCLIPLQMVQRRLDHKPVNTRWYNLEKHVIVEGEKKETKFASRIHLRVCLDGGYHVLDESTQYSSDLRPTAKQLWKPSIGILEVGIINAQGLMPMKTREGRGTTDAYCVAKYGQKWIRTRTIVDSSVPKWNEQYTWEVFDLSTVITVGVFDNGHLQGGDKSGGSKDSRIGKVRIRLSTLEADRVYTHSYPLLVLHTSGVKKTGELQLAVRFTSSSFINILYLYSQPLLPKMHYIHPLSVIQLDNLRHKAIQIVSMRLSRAEPPLRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWRNPITTILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSSDMVRMRYDRLRSIAGKVQTVVGDLATQGERFQSLLSWRDPRATALFVTFCFFAAIVLYVTPFQVVALLTGFYVLRHPRFRHKLPSVPINFFRRLPARSDSML* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3017 773 Gene3D C2 domain 360 497 IPR035892 -
Dod03g3017 773 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Dod03g3017 773 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 362 496 IPR035892 -
Dod03g3017 773 CDD C2B_MCTP_PRT_plant 41 165 - -
Dod03g3017 773 ProSiteProfiles C2 domain profile. 345 471 IPR000008 -
Dod03g3017 773 CDD C2D_MCTP_PRT_plant 363 490 - -
Dod03g3017 773 SMART C2_3c 41 137 IPR000008 -
Dod03g3017 773 SMART C2_3c 202 300 IPR000008 -
Dod03g3017 773 SMART C2_3c 363 470 IPR000008 -
Dod03g3017 773 Gene3D C2 domain 187 332 IPR035892 -
Dod03g3017 773 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Dod03g3017 773 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 773 - -
Dod03g3017 773 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 773 - -
Dod03g3017 773 CDD C2C_MCTP_PRT_plant 202 351 - -
Dod03g3017 773 Gene3D C2 domain 40 162 IPR035892 -
Dod03g3017 773 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 353 IPR035892 -
Dod03g3017 773 Pfam C2 domain 41 134 IPR000008 -
Dod03g3017 773 Pfam C2 domain 201 307 IPR000008 -
Dod03g3017 773 Pfam C2 domain 362 473 IPR000008 -
Dod03g3017 773 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Dod03g3017 773 Pfam Plant phosphoribosyltransferase C-terminal 618 773 IPR013583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3017 Dod-Chr3 62527513 62530952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3017 1 773 Lipid Metabolism Gene Families AT3G57880 82.300 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3017 - - gmx:100788273 1418.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g3017 03 62527513 62530952 Dod03g3017 03 62527513 62530952 ECH
Dod10g1798 10 39177915 39179891 Dod03g3017 03 62527513 62530952 PCT