Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1786 ATGAGTTTGTCAGAACCACAAACTCCCATGCACATAGGTAAGTGCTTCTTCCCTACACAATCGATCATTTCACTTTTTCCTGTATTCCACGACACACTAAACGGCCAAACAAATAAACTGCGTTTCGTTTCGCTAAAATCGATTTTCGTTGCCACCGCAATGGGCGGCGTTTGGTTCACACAGCAAACAACATTAGCAGCAGCAGCAGTAGGGATAATGCTGCTGGCACTGAGCTCCGCCGTGAGGTCGTGTCCGCCGTCGGATAGGGCGGCGATGCTGGCCTTCAAGGCGGCGCTCCACGAGCCATACCTCGGAATCTTCGACTCGTGGACTGGCCTCGACTGCTGCCACAATTGGTACGGCGTGAGCTGCGACCAGGAGAGCCGCCGCGTCGCCGACATCAACCTCCGAGGCGAGTCGGAGGAGCCGATCTTCCAGAAGCGCCACCGCAACACCGGCTACATGACCGGATACATCTCTCCGGCGATCTGCAAGCTCACTCGCCTCTCCAGCATCACAATCGCCGACTGGAAGGGAATCTCCGGCGAGATCCCCCGCTGCATAACCTCCCTCCCATTCCTCCGCATCATCGACCTCATCGGAAACCGAATCTCCGGCACAATCCCCTCCGACATCGGGAGGCTCCGCCGCCTCACGGTGCTCAACGTCGCCGACAACGTAATCTCCGGGACTATCCCGCCGTCGGTGACAAACCTCACTAGCCTGATGCACCTGGACCTCCGGAATAACCGGATGTCCGGGCCCATCCCGCGGGCCTTCGGCAGGCTCCAAATGCTTAGCCGGGCCTTATTGAGCGGGAACCGGATCAGTGGGCCCATCCCGGGCACAGTCTCTAATATTTACCGTCTCTCGGATCTGGATCTGTCTCGAAACCAGATATCCGGGCCCATACCCGAATCGCTGGGTAAAATGGCGGTTCTGTCCACTTTAAATTTGGACATGAATAAGCTTTCGGGACAAATTCCCGTGAGTTTGTTCAGTTCGGGCATAAGTGACTTGAACTTGAGCCGTAACAGCTTGGACGGTAAAATCCCGGACGCGTTCGGTGTTAGGTCTTATTTCACGGTGCTTGATTTGTCTTATAATAACCTCAAAGGGCCCATCCCGAAATCCATATCCTCTGCTTCGTATATCGGGCACTTGGATTTGAGTCACAACCATCTCTGTGGCCCGATTCCGTCTGGGTCGCCGTTTGATCACCTCGAAGCGTCGTCGTTTCTTTACAACGATTGCCTCTGCGGGAAGCCATTACTCAAGGCTTGCTAA 1287 0.5509 MSLSEPQTPMHIGKCFFPTQSIISLFPVFHDTLNGQTNKLRFVSLKSIFVATAMGGVWFTQQTTLAAAAVGIMLLALSSAVRSCPPSDRAAMLAFKAALHEPYLGIFDSWTGLDCCHNWYGVSCDQESRRVADINLRGESEEPIFQKRHRNTGYMTGYISPAICKLTRLSSITIADWKGISGEIPRCITSLPFLRIIDLIGNRISGTIPSDIGRLRRLTVLNVADNVISGTIPPSVTNLTSLMHLDLRNNRMSGPIPRAFGRLQMLSRALLSGNRISGPIPGTVSNIYRLSDLDLSRNQISGPIPESLGKMAVLSTLNLDMNKLSGQIPVSLFSSGISDLNLSRNSLDGKIPDAFGVRSYFTVLDLSYNNLKGPIPKSISSASYIGHLDLSHNHLCGPIPSGSPFDHLEASSFLYNDCLCGKPLLKAC* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1786 428 Pfam Leucine rich repeat N-terminal domain 86 125 IPR013210 -
Dod10g1786 428 SUPERFAMILY L domain-like 83 425 - -
Dod10g1786 428 Gene3D Ribonuclease Inhibitor 81 151 IPR032675 -
Dod10g1786 428 Pfam Leucine rich repeat 338 395 IPR001611 GO:0005515
Dod10g1786 428 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Dod10g1786 428 Gene3D Ribonuclease Inhibitor 152 428 IPR032675 -
Dod10g1786 428 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 65 428 - -
Dod10g1786 428 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 65 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1786 Dod-Chr10 38998063 38999721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1786 155 428 Receptor kinase-like Gene Family AT5G62230 33.223 7.17e-37 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1786 - - gmx:100804739 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1786 10 38998063 38999721 Dod10g1786 10 38998063 38999721 ECH
Dod10g1786 10 38998063 38999721 Dod03g3009 03 62406346 62407470 ECH
Dod10g1786 10 38998063 38999721 Dod03g3008 03 62400630 62403034 PCT