Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g3008 ATGTCTATAACTGCTAGTGCAGTTACACTATCACTAGCCATCATCACTACTCTATTGGCATTCACACCCTCACACGTCGAGTCCTGCCCTTCTTCCGAATGGGCATCCCTCATGTCCATCAGGGCCTCCCTCACCGAACCAAACTTCGCAATCTTCCACACATGGCGCGGCACCAACTGCTGCTACAAATGGTACGGCATCACCTGCGACCCCACCACGCGCCGCGTCGCAGAGATCAACCTCAACGGCCTAACCGTCTCCGACAACCGCCGCCCGCTCAACCGCACCGCCAAAACCGGGCACATGACCGGCCACATTTCCCCTTCAGTCTGCAACCTCACGCAGCTCTCCTCCATCACAGTCTCAGACTGGAAGGGCATTTCGGGAAATATACCTAACTGCATCACAACCCTCACGTTCCTCCAAACCCTCGACCTCTCCGGTAACCTCATCGAAGGCGAGGTCCCCGTAAACATAGGATCTCTCACGCGCCTCACCCTCCTCAGCCTCGCAGACAATCTTATCTCCGGAACCATCCCACCGACGCTTACGAACCTCAACAACCTCGTACACCTCGACCTCCGCAACAACCAGTTGGAGGGTCAGATCCCAACGGACTTCGGGCGGCTCGGGAGGCTTAACCGCGCGTTTCTGAGCCATAACCGTCTCAACGGTCAGATCCCCGTAACCGTTTCCGGAATTTACGGCCTTGCTGACCTGGACCTGTCGATGAACCGATTGTCCGGTCCGGTTCACGATTCTTTGGGCCGGATGCCGGTTCTGGACTCGCTGAAACTGAAGTATAACAGATTGACGGGTGAGATTCCTGCGAGCTTGTTGGGTTCGAGGGTGAGCCACTTGGATCTGAGCAGGAACATGCTGAGTGGGGAAATTGCTGACGTGTTCCGAGAAGGGTCGTATTTCATAAACCTTGATTTGTCGCATAATGGCTTGAGTGGCTCTGTTCCAAAGTCTTTGGGTTCAGCTACTTACGTTGGTCACTTGGACTTGAGTCACAACCGTTTGTGTGGCAGGATTCCGCGCGGTGCTATTGCTGCAGATGAGTTCCTATTTGCTGATTCTGCAGATCATGGAGCACTATTTTAA 1107 0.5429 MSITASAVTLSLAIITTLLAFTPSHVESCPSSEWASLMSIRASLTEPNFAIFHTWRGTNCCYKWYGITCDPTTRRVAEINLNGLTVSDNRRPLNRTAKTGHMTGHISPSVCNLTQLSSITVSDWKGISGNIPNCITTLTFLQTLDLSGNLIEGEVPVNIGSLTRLTLLSLADNLISGTIPPTLTNLNNLVHLDLRNNQLEGQIPTDFGRLGRLNRAFLSHNRLNGQIPVTVSGIYGLADLDLSMNRLSGPVHDSLGRMPVLDSLKLKYNRLTGEIPASLLGSRVSHLDLSRNMLSGEIADVFREGSYFINLDLSHNGLSGSVPKSLGSATYVGHLDLSHNRLCGRIPRGAIAADEFLFADSADHGALF* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g3008 368 Pfam Leucine Rich repeat 139 154 IPR001611 GO:0005515
Dod03g3008 368 SUPERFAMILY L domain-like 28 280 - -
Dod03g3008 368 Gene3D Ribonuclease Inhibitor 25 97 IPR032675 -
Dod03g3008 368 Pfam Leucine Rich Repeat 188 209 IPR001611 GO:0005515
Dod03g3008 368 Gene3D Ribonuclease Inhibitor 98 358 IPR032675 -
Dod03g3008 368 SUPERFAMILY L domain-like 275 350 - -
Dod03g3008 368 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
Dod03g3008 368 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 10 351 - -
Dod03g3008 368 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 10 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g3008 Dod-Chr3 62400630 62403034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g3008 101 351 Receptor kinase-like Gene Family AT5G01890 29.605 6.75e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g3008 - - lja:Lj3g3v3246320.1 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1786 10 38998063 38999721 Dod03g3008 03 62400630 62403034 PCT