Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1708 ATGGCAACGAATTCTTCTAATGGTGATGAACAAACCACAAAACATCCTCCCTTGCCATCCCCATCGCGCTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTTTGGTCACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTTGACAGATTGATGGAAAATGAAAAAAACGAGGTAATTGTTGCCGATAACTTCTTCACTGGATCCAAAGACAACCTTAGAAAATGGGTTGGTCATCCAAGATTTGAGCTAATTCGTCATGATGTTACAGAGCACTTGTTGGTTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCTTCTCCGATTTTCTACAAGTATAATCCTGTAAAGACAATAAAGACAAATGTAATTGGAACACTGAACATGCTTGGACTTGCAAAGCGAGTGCGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGGGACCCTCTTATGCATCCACAACCAGAAGAATATTGGGGCAATGTTAACCCTATTGGAGTTCGGAGCTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGCATTGCCAGAATATTTAACACATATGGACCACGCATGAATATTGATGATGGACGTGTCGTAAGCAACTTCATTGCTCAAGCAGTTCGTGGTGAACACCTAACAGTCCAACATCCAGGAACACAAACTCGCAGTTTCTGCTACGTCTCTGACCTGGTTGATGGCCTTATTTGTCTCATGGAAGGGGAACACACCGGTCCAGTCAACCTTGGGAACCCAGGTGAGTTCACAATGATTGAACTGGCTGAGAATGTGAAGGAGCTTATTAATCCAAGTGTGGAGATAAAGATGGTGGAGAACACTCCGGATGATCCTCGGCAAAGAAAACCAGACATAACAAAAGCAAGGGAATTGCTTGGATGGGAACCAAAGATCAAGTTGCGGGATGGTCTTCCTCTTATGGAAGAAGACTTCCGCCAGAGGCTTGGGGTTCCCAGAAAGAACTAA 1038 0.4364 MATNSSNGDEQTTKHPPLPSPSRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLRKWVGHPRFELIRHDVTEHLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVRARILLTSTSEVYGDPLMHPQPEEYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRGEHLTVQHPGTQTRSFCYVSDLVDGLICLMEGEHTGPVNLGNPGEFTMIELAENVKELINPSVEIKMVENTPDDPRQRKPDITKARELLGWEPKIKLRDGLPLMEEDFRQRLGVPRKN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1708 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Dod10g1708 345 Gene3D - 155 340 - -
Dod10g1708 345 Gene3D - 29 154 - -
Dod10g1708 345 CDD UGD_SDR_e 32 336 - -
Dod10g1708 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
Dod10g1708 345 MobiDBLite consensus disorder prediction 1 21 - -
Dod10g1708 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 339 IPR036291 -
Dod10g1708 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1708 Dod-Chr10 38232741 38236570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1708 29 328 Miscellaneous Gene Families AT1G02000 23.881 4.04e-16 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1708 K08678 - gmx:100819843 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1708 10 38232741 38236570 Dod10g1708 10 38232741 38236570 ECH
Dod10g1708 10 38232741 38236570 Dod03g2912 03 61310824 61315112 ECH
Dod10g1708 10 38232741 38236570 Dod03g2911 03 61304647 61309626 PCT
Dod03g2912 03 61310824 61315112 Dod10g1708 10 38232741 38236570 PCT