Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2912 ATGGCAGCGAATTCTTCTTCTAATGGTGAACACCAGAAAGCAGCAAAGCAACCTCCCCTGCCATCTCCCTTGCGTTTTTCCAAGTTCTTTCAGTCCAATATGAGAATTTTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCATCTAGTTGACAGATTGATGGAAAATGAGAAAAATGAGGTCATTGTTGTTGATAACTTCTTCTCAGGATCTAAAGACAACCTTAGGAAATGGATTGGTCATCCAAGATTTGAGTTGATTCGTCATGATGTCACGGAGCAATTGTTGGTTGAGGTTGATCAAATCTACCACCTTGCTTGCCCTGCTTCTCCAATCTTTTACAAACACAATCCCGTAAAGACAATAAAGACAAATGTGATTGGAACACTAAACATGCTTGGGCTTGCTAAGCGAGTGGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGTGACCCCCTTGTGCATCCACAACCAGAAGACTATTGGGGAAATGTTAACCCTATCGGAGTTCGAAGTTGTTATGATGAGGGCAAACGAGTGGCAGAAACATTGATGTTTGATTATCATAGGCAACATGGAATCGAAATACGCATTGCAAGAATCTTTAACACATATGGACCTCGCATGAATATTGATGATGGGCGTGTTGTCAGCAACTTCATTGCTCAAGCAGTCCGTGGTGAATCCTTGACAGTTCAACTTCCGGGAACTCAAACTCGTAGCTTTTGCTATGTCTCTGACTTGGTTGATGGTCTTATACGTCTAATGGAAGGGGAAGACACTGGGCCAATCAACCTTGGGAACCCAGGCGAGTTTACAATGATGGAACTTGCAGAGACTGTGAAAGAGCTTATCAATCCAAATGTGGAAATAAAGTTGGTTGAGAACACTCCTGATGATCCGCGACAAAGGAAGCCAGAGATTAAAAAAGCAAAGGAAGTGCTGGGGTGGGAACCAAAGATCAAGTTGAGGGATGGCCTCCCTCTTATGGAGGAGGATTTCCGTACAAGGCTTGGGGTTCCCAAAAAGAACTAA 1044 0.432 MAANSSSNGEHQKAAKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVVDNFFSGSKDNLRKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQPEDYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAVRGESLTVQLPGTQTRSFCYVSDLVDGLIRLMEGEDTGPINLGNPGEFTMMELAETVKELINPNVEIKLVENTPDDPRQRKPEIKKAKEVLGWEPKIKLRDGLPLMEEDFRTRLGVPKKN* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2912 347 CDD UGD_SDR_e 34 338 - -
Dod03g2912 347 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 3 347 - -
Dod03g2912 347 MobiDBLite consensus disorder prediction 1 22 - -
Dod03g2912 347 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 29 340 IPR036291 -
Dod03g2912 347 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 3 347 IPR044516 GO:0042732|GO:0048040|GO:0070403
Dod03g2912 347 Gene3D - 33 341 - -
Dod03g2912 347 Pfam GDP-mannose 4,6 dehydratase 37 331 IPR016040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2912 Dod-Chr3 61310824 61315112 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2912 36 330 Miscellaneous Gene Families AT4G00110 24.390 2.50e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2912 K08678 - qsu:112026144 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2912 03 61310824 61315112 Dod03g2912 03 61310824 61315112 ECH
Dod10g1708 10 38232741 38236570 Dod03g2912 03 61310824 61315112 ECH
Dod03g2912 03 61310824 61315112 Dod10g1708 10 38232741 38236570 PCT