Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1684 ATGGAGCTTGATCTCTCTCCCCAGCTGGCGAAGAAGGTGTACGGTGGCAATGGTGGGTCCTACTACGCTTGGTCCCCTTCTGAGCTCCCCATGCTCCGCGAAGGTAACATTGGCGCGGCAAAGCTCTCTCTCGAGAAGAATGGCTTCGCCCTCCCTTGTTACTCTGATTCCGCCAAGGTTGCTTACGTCCTCCAAGGGTGTGGAGTTGCTGGAATAGTGCTCCCTGAGAAAGAAGAGAAAGTTGTTGCAATCAAGAAGGGTGATGCCTTGGCACTCCCCTTTGGTGTTGTGACCTGGTGGTATAACAAGGAAGACACTGAGCTGGTTGTTCTGTTCCTTGGTGACACCTCAAAAGCTCACAAGGCTGGTGAATTCACTGACTTTTTTCTCACTGGATCCAATGGAATCTTCACTGGATTCTCCTCTGAGTTTGTGGGCAGGGCTTGGGACTTGGAAGAGAATGATGTCAAGGCCCTTGTTGGGAAGCAATCAGGCAAGGGGATTGTGAAGCTGGATGGGAGCATCAGCCTACCTGAGCCTAAAGCCGACCACCGGAGTGGGATGGCCTTGAACTGTGAAGAGGCTCCATTGGATGTTGACATCAAGGGTGGAGGAAGGGTTGTGGTGTTGAACACCCAGAATCTTCCATTGGTTGGTGAGGTTGGCCTTGGAGCTGACCTTGTAAGGTTGGATGGAAAAGCCATGTGCTCCCCAGGATTCTCTTGTGACTCTGCTTTACAGGTTACTTACATTGTTAGAGGGAGTGGCCGGGTTCAGGTTGTTGGTGTTGATGGCAAGAGGGTTTTGGAGACAACTGTCAAAGCTGGTAATTTGTTCATTGTGCCAAGGTTTTTTGTGGTCTCAAAGATTTCTGATCCTGATGGACTGGAGTGGTTCTCTATCATCACCACCCCTAATCCTATGTTCACCCACTTGGCTGGAAGAACTTCGGTATGGAAGGCTTTATCTCCTGCGGTTCTGCAGGCTGCTTTCAATGTGGATTCAGGACTTGAGAATAACTTCCGTTCAAAGAGGACTGCCGATGCCATTTTCTTCCCTCCACCAAAGTAG 1071 0.5023 MELDLSPQLAKKVYGGNGGSYYAWSPSELPMLREGNIGAAKLSLEKNGFALPCYSDSAKVAYVLQGCGVAGIVLPEKEEKVVAIKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAHKAGEFTDFFLTGSNGIFTGFSSEFVGRAWDLEENDVKALVGKQSGKGIVKLDGSISLPEPKADHRSGMALNCEEAPLDVDIKGGGRVVVLNTQNLPLVGEVGLGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRVQVVGVDGKRVLETTVKAGNLFIVPRFFVVSKISDPDGLEWFSIITTPNPMFTHLAGRTSVWKALSPAVLQAAFNVDSGLENNFRSKRTADAIFFPPPK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1684 356 CDD cupin_11S_legumin_N 4 173 - -
Dod10g1684 356 SMART Cupin_1_3 195 339 IPR006045 -
Dod10g1684 356 SMART Cupin_1_3 3 157 IPR006045 -
Dod10g1684 356 Gene3D Jelly Rolls 3 194 IPR014710 -
Dod10g1684 356 PANTHER OS03G0336100 PROTEIN-RELATED 2 347 - -
Dod10g1684 356 SUPERFAMILY RmlC-like cupins 16 345 IPR011051 -
Dod10g1684 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Dod10g1684 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Dod10g1684 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Dod10g1684 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Dod10g1684 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Dod10g1684 356 Gene3D Jelly Rolls 195 356 IPR014710 -
Dod10g1684 356 CDD cupin_11S_legumin_C 198 353 - -
Dod10g1684 356 Pfam Cupin 11 157 IPR006045 -
Dod10g1684 356 Pfam Cupin 199 335 IPR006045 -
Dod10g1684 356 PANTHER - 2 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1684 Dod-Chr10 37973077 37975586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1684 35 333 Miscellaneous Gene Families AT2G18540 21.591 3.37e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1684 - - gmx:100795038 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1684 10 37973077 37975586 Dod10g1684 10 37973077 37975586 ECH
Dod10g1684 10 37973077 37975586 Dod03g2888 03 61043143 61047596 PCT