Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2888 ATGGAGATTGATCTTTCACCCCAGTTGGCCAAGAAGGTGTATGGAGGCAATGGTGGATCTTACTGTGCTTGGTCCCCTTCTCAACTTCCCATGTTACGTGAAGGGAATATCGGTGCTGCTAAGCTAGCTCTTGAGAAGAATGGCTTTGCCCTTCCTCGTTACTCTGATTCTTCAAAGGTTGCATATGTTCTCCAAGGCAGTGGAGTTGCTGGAATTGTGCTCCCTGAATCAGAAGAGAAGGTTGTTGCAGTCAAGAAGGGTGATGCATTAGCACTCCCCTTTGGTGTGGTGACATGGTGGTACAACAAAGAAGACACTGAGTTGGTTGTTCTGTTCCTTGGTGACACATCAAAAGCACACAAAGCTGGTGAATTCACAGAATTTTATCTCACTGGTTCAAATGGAATCTTCACTGGCTTCTCAACTGAGTTTGTGGGAAGAGCTTGGGACTTAGAAGAGAAAGATGTGAAGACCCTTGTTGGGAATCAATCTGCCAATGGCATAGTGAAGCTTGAAGGAGGGAATGTGAACCTTCCTGAGCCCAAAGAGGAGCATAGGAAGGGCATGGCTTTGAACTGTGAGGAGGCTCCTTTGGATGTTGACATAAAGAATGGTGGTAGGGTTGTGGTGTTGAACACAAAGAACCTTCCTTTGGTTGGTGAGGTTGGGTTAGGTGCTGACCTCGTGAGGCTTGATGGGAAGGCAATGTGCTCCCCTGGATTCTCTTGTGACTCTGCATTGCAAGTTACTTATATTGTTAGAGGGAGTGGTCGTGTTCAGGTTGTTGGTGTTGATGGCAAGAGAGTTTTGGAGACAACTGTGAAAGCTGGGAACTTATTCATTGTTCCTAGGTTCTTTGTGGTCTCAAAGATTGCTGACCCTGATGGCATGGAGTGGTTCTCTATCATCACCACCCCTAATCCTATATTTATCCACTTGGCTGGAAGCTCTTCGGTGTGGAAGGCTCTATCACCTACAGTTCTGCAGGCTGCACTCAATGTGGATTCAGGAGTGGAGCAACTCTTCCGTTCAAAAAGGACTGCTGATGCGATCTTTTTCCCTCCACCAAATTAG 1074 0.4665 MEIDLSPQLAKKVYGGNGGSYCAWSPSQLPMLREGNIGAAKLALEKNGFALPRYSDSSKVAYVLQGSGVAGIVLPESEEKVVAVKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAHKAGEFTEFYLTGSNGIFTGFSTEFVGRAWDLEEKDVKTLVGNQSANGIVKLEGGNVNLPEPKEEHRKGMALNCEEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGKAMCSPGFSCDSALQVTYIVRGSGRVQVVGVDGKRVLETTVKAGNLFIVPRFFVVSKIADPDGMEWFSIITTPNPIFIHLAGSSSVWKALSPTVLQAALNVDSGVEQLFRSKRTADAIFFPPPN* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2888 357 CDD cupin_11S_legumin_N 4 173 - -
Dod03g2888 357 SMART Cupin_1_3 3 157 IPR006045 -
Dod03g2888 357 SMART Cupin_1_3 196 340 IPR006045 -
Dod03g2888 357 PANTHER - 2 348 - -
Dod03g2888 357 Gene3D Jelly Rolls 3 196 IPR014710 -
Dod03g2888 357 Pfam Cupin 11 156 IPR006045 -
Dod03g2888 357 Pfam Cupin 200 336 IPR006045 -
Dod03g2888 357 SUPERFAMILY RmlC-like cupins 16 346 IPR011051 -
Dod03g2888 357 Gene3D Jelly Rolls 197 357 IPR014710 -
Dod03g2888 357 PANTHER OS03G0336100 PROTEIN-RELATED 2 348 - -
Dod03g2888 357 PRINTS 11-S seed storage protein family signature 212 232 IPR006044 GO:0045735
Dod03g2888 357 PRINTS 11-S seed storage protein family signature 259 275 IPR006044 GO:0045735
Dod03g2888 357 PRINTS 11-S seed storage protein family signature 317 334 IPR006044 GO:0045735
Dod03g2888 357 PRINTS 11-S seed storage protein family signature 277 292 IPR006044 GO:0045735
Dod03g2888 357 PRINTS 11-S seed storage protein family signature 295 313 IPR006044 GO:0045735
Dod03g2888 357 CDD cupin_11S_legumin_C 199 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2888 Dod-Chr3 61043143 61047596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2888 35 334 Miscellaneous Gene Families AT2G18540 22.636 5.44e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2888 - - gmx:100782055 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1684 10 37973077 37975586 Dod03g2888 03 61043143 61047596 PCT