Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1680 ATGGAGTTCCTTCTCACACCTATGCTTTATGTTGTTACGGCATTGTACTTGTGTTTCCTGGTGTGGAAGCTGTTTGATCAGAGAAGGGACCAGGAGTGCTACATTCTGGGGTACCAATGCTACAAGCCAAGCGATGACAGAAAGCTTGGAACTGAGTGCTGTGGCAAGATCATAAGCAGGAACAAGAGCTTGGGACTCAATGAGTACAAGTTCCTCCTCAAGGCCATTGTGAGCTCTGGCATTGGGGAAGAAACTTATGCCCCAAGAAACATCATCGAAGGCCACGAGACGGATCCATTGCTAGAAGATGGGATCTCAGAGATGGAGGAGTTCTTCTACGACAGCATTGCCAAGGTTCTTGCAAAGACAGGCATTTCCCCTTCGGAGATCGATGTCCTTGTGGTGAATGTGTCTATGCTCGCAGCTGTTCCTTCCTTATCATCTCGAATCATTAACCATTACAAGATGAGGCAGGATGTTAAGGCATTCAACCTCACTGGCATGGGCTGCAGTGCTAGCCTCGTTTCAATGGACATTATTAGGAACATCCTCAAGTCACAAAGGAACAAGTGTGCTCTTTTGGTGACCTCAGAGTCCCTGAGTCCCAATTGGTACTCAGGGAGTGACAGATCAATGATCCTTGCCAACTGTTTGTTCAGGAGTGGTGGATGTGTCATTCTCCTGACCAATAAGAGATCCTTAAGGCACAAGGCTATATTGAAGCTCAAGTGCTTGGTGAGGACCCATCATGGGTCCAAAGATGATGCATATGGTTGTTGCAATCAAAAGGAGGATGATGAGGGCAGGCTTGGTTTTTACCTTGGGAAAAATCTTCCCAAAGCAGCCACAAGGGCATTTGTTGATAATCTGAGGGTGTTATCACCCAAGATTCTGCCAGCTAGGGAGTTGTTAAGGTTCATGATTGTGTCACTTGTGAAGAAGGTGATGGCTAGCAGCTCCCCTAAGACAATAGGTGGGGGATCTGCTAAGTCCCCGTTGAACTTCAAGACTGGGGTGGATCACTTCTGCCTGCACACGGGGGGGAAGGCAGTGATTGATGGGATAGGGATGAGCCTGGATCTGTGTGAGCATGACCTTGAGCCAGCTAGGATGACACTGCACCGTTTTGGTAACACATCGGCTAGTAGCCTGTGGTATGTGCTAGGGTATATGGAGGCCAAGAAGAGGCTCCGCAAAGGTGACAGGGTATTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTAATGAAGGATCTGGGGGATAGAAATGTGTGGGACGATTGCATTGATGACTACCCACCAGACTCATTGGCCAACCCTTTCATGGAGAGGTACGGTTGGATCAACAAAGTTGAAGATGCAGCTACCTTCAATTTCCCAGATTTTCTGAAGTAA 1413 0.477 MEFLLTPMLYVVTALYLCFLVWKLFDQRRDQECYILGYQCYKPSDDRKLGTECCGKIISRNKSLGLNEYKFLLKAIVSSGIGEETYAPRNIIEGHETDPLLEDGISEMEEFFYDSIAKVLAKTGISPSEIDVLVVNVSMLAAVPSLSSRIINHYKMRQDVKAFNLTGMGCSASLVSMDIIRNILKSQRNKCALLVTSESLSPNWYSGSDRSMILANCLFRSGGCVILLTNKRSLRHKAILKLKCLVRTHHGSKDDAYGCCNQKEDDEGRLGFYLGKNLPKAATRAFVDNLRVLSPKILPARELLRFMIVSLVKKVMASSSPKTIGGGSAKSPLNFKTGVDHFCLHTGGKAVIDGIGMSLDLCEHDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLRKGDRVLMISFGAGFKCNSCLWEVMKDLGDRNVWDDCIDDYPPDSLANPFMERYGWINKVEDAATFNFPDFLK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1680 470 Gene3D - 69 421 IPR016039 GO:0016746
Dod10g1680 470 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 453 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod10g1680 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 460 - -
Dod10g1680 470 CDD CHS_like 14 419 - -
Dod10g1680 470 PANTHER 3-KETOACYL-COA SYNTHASE 1 460 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod10g1680 470 SUPERFAMILY Thiolase-like 27 422 IPR016039 GO:0016746
Dod10g1680 470 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 339 420 IPR013747 -
Dod10g1680 470 Pfam FAE1/Type III polyketide synthase-like protein 27 314 IPR013601 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1680 Dod-Chr10 37938569 37940765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1680 21 467 Acyl Lipid Metabolism Gene Families AT2G28630 68.421 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1680 K15397 - gmx:100790992 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1680 10 37938569 37940765 Dod10g1680 10 37938569 37940765 ECH
Dod10g1680 10 37938569 37940765 Dod03g2875 03 60853933 60856053 ECH
Dod10g1680 10 37938569 37940765 Dod03g2875 03 60853933 60856053 PCT