Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2875 ATGGATCTCCTCACTTTACTGTCCCTCATTCCAGCATTGTACTTGTGTGTCCTGATCTGGAACTTGTTAGATCAAAGGAGGGACCAAGAGTGCTACATACTGGACTATCAATGTTACAAGCCTTCAGATGACAGAATGCTTGGCACAGAGTTCTGTGGCAGGGTCATCAAAAGGTGTGAATCCTTAGGCATCAATGAGTACAAGTTCCTCCTCAAGGCCATTGTGAGTTCTGGCATAGGGGAGCAAACTTATGCTCCAAGAAATGTCTTTGATGGCCGTGAGGCAAACCCCACTTTGAATGATGGCATCTCAGAAATGGAGGAGTTCTTCAGTGACAGCATTGCAAAGCTTCTTGCAAGGTCAGGTATCTCACCTTCTGAGATTGATGTCCTTGTGGTTAATATTTCTATGCTAGCTGCTGTTCCTTCTTTGTCGTCTAGGATCATCAATAGGTACAAGTTGAGGCATGACATAAAAGTTTACAACCTCACTGGCATGGGGTGTAGTGCTAGCCTTATATCACTGGACATTGTTAAGGACATTTTCAAGTCACAAAGGAACAAGCTTGCTCTTTTGGTGACATCAGAGAGTTTAAGCCCAAATTGGTATTCCGGCAGTGACAGATCAATGATCCTTGCCAATTGTCTGTTCCGGTCCGGTGGGTGCGCCATTCTCTTGACCAACAAGAGGTCTTTGAGGCACAGGGCTATGTTTAAGTTGAAGTGCTTGGTGAGGACCCATCATGGGGCTAGAGAAGAGGCCTATAGTTGTTGCATCCAAAAGGAAGATGACCAAGGCAAGCTTGGTTTCCATCTTGGGAAGACTCTCCCAAAGGCAGCTACAAGGGCTTTTATTGACAATCTGAGGGTGATTTCACCCAAGATTTTACCAGCTAGGGAGTTGTTAAGGTTCCTTGTTGTGTTCCTAATTAAGAAGTTGAAGAAAAGTGGTTCCACTAAGTCCACAATTGGGGGTACTATTACCAAGTCCCCATTGGATTTCAAAACTGGGGTTGACCACTTTTGCATCCACACTGGTGGGAAGGCTGTGATTGATGGAATTGGGATGAGCTTGGATCTGACTGAGTATGATCTTGAGCCAGCTAGGATGACACTACACCGTTTTGGTAACACCTCAGCTAGTAGCCTATGGTATGTGCTAGGGTACATGGAGGCCAAGAAGAGGCTGAAGAAGGGTGACAGGGTACTGATGATAAGCTTTGGTGCTGGCTTTAAATGCAACAGCTGTTTGTGGGAGGTAATGAGGGATCTTGGGGATGCAAATGTGTGGGCCGAATGCATTGATGACTATCCACCAGAGTCTTTGGCCAACCCTTTCATGGAGAAGTATAGTTGGATCAACGATGTTGAGGATCCAACAACATGTGAAATCCCAGATTTTCTCAAGTAA 1410 0.4532 MDLLTLLSLIPALYLCVLIWNLLDQRRDQECYILDYQCYKPSDDRMLGTEFCGRVIKRCESLGINEYKFLLKAIVSSGIGEQTYAPRNVFDGREANPTLNDGISEMEEFFSDSIAKLLARSGISPSEIDVLVVNISMLAAVPSLSSRIINRYKLRHDIKVYNLTGMGCSASLISLDIVKDIFKSQRNKLALLVTSESLSPNWYSGSDRSMILANCLFRSGGCAILLTNKRSLRHRAMFKLKCLVRTHHGAREEAYSCCIQKEDDQGKLGFHLGKTLPKAATRAFIDNLRVISPKILPARELLRFLVVFLIKKLKKSGSTKSTIGGTITKSPLDFKTGVDHFCIHTGGKAVIDGIGMSLDLTEYDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKKGDRVLMISFGAGFKCNSCLWEVMRDLGDANVWAECIDDYPPESLANPFMEKYSWINDVEDPTTCEIPDFLK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2875 469 CDD CHS_like 12 418 - -
Dod03g2875 469 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 338 419 IPR013747 -
Dod03g2875 469 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 - -
Dod03g2875 469 SUPERFAMILY Thiolase-like 25 421 IPR016039 GO:0016746
Dod03g2875 469 Pfam FAE1/Type III polyketide synthase-like protein 25 313 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dod03g2875 469 PANTHER 3-KETOACYL-COA SYNTHASE 1 459 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod03g2875 469 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 452 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod03g2875 469 Gene3D - 66 420 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2875 Dod-Chr3 60853933 60856053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2875 19 466 Acyl Lipid Metabolism Gene Families AT2G28630 70.833 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2875 K15397 - gmx:100810048 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2875 03 60853933 60856053 Dod03g2875 03 60853933 60856053 ECH
Dod10g1680 10 37938569 37940765 Dod03g2875 03 60853933 60856053 ECH
Dod10g1680 10 37938569 37940765 Dod03g2875 03 60853933 60856053 PCT