Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1678 ATGAATCCAATGGCTACACCAGCGGTGCAGCAAGCTAGCACCCCTAGGAAGAAAATGACCACACAGTTAACCGGTAAAAGAGATGATACCCCTTTGCATGCTGCAGCAAGAGCAGGGAATCTGGCTGTCCTGAGGGAAATCTTTACGGGTACCGAAGTGGATGAACTGCGTGAGATATTGGCAAGGCAGAACCAGGATGGAGAAACAGCCCTTTTTGTAGCTGCTGAATATGGGGATGTTGATGTGGTTAGGGAGATGATTCAATATTATGATCTTGTTGATGCTGGAATCAAAGCAAGAAATGGTTTTGATGCACTTCATGTTGCTGCCAAACAAGGGGATTTAAATGTACTGAAGATCCTTATGGAGGCTCATCCTGAATTGTCAATGACTGTGGATCCATCCAACACCACAGCTTTGCACACAGCTGCAACTCAAGGGCACATTGAGATAGTGAAGTTCCTGTTGGAAGAAGGAAGTAGCCTAGCAAGCATTGCTAAGAGTAATGGGAAAACAGCTTTGCATTCTGCTGCAAGGAATGGACATTTGGAGGTTGTGAAAGCACTTCTTGAGCAGAATGCTGGGATTGCAACGCGGACAGATAAGAAGGGCCAGACAGCGCTTCACATGGCAGTGAAGGGACAGAGTCTTGAGGTGGTGGAGGAGTTGATCAAAGCAGATCCCTCATCAATAAACATGGTTGACACTAAAGGAAACACAGCATTGCATATAGCAACCAGGAAGGGCAGGGCTAAGATTGTGAACAAGCTGCTCGAACAGAAAGAAACGAACACATCTGCAGTTAACAGATCCGGCGAGACTGCAGTAGACACGGCAGAGAAAACCGGGAACCACCATGTCAAATCCATTCTGCTGGAACACGGTGTTCAGAGCGCCAAAGCCATGAAGCCACAGGGACCAACAGCCACAGCGCGAGAGTTGAAACAAACCGTGAGTGACATAAAGCACGAGGTCCATCACCAATTGGAACACACTCGCCAGACCCGAAAACGAGTCCAGGGCATTGCCAAACGCATCAACAAGATGCACGCCGAAGGCCTCAACAATGCAATCAACTCCAACACCGTGGTGGCAGTGCTAATAGCCACCGTCGCCTTCGCAGCCATATTCACTGTCCCTGGCCAGTTCGTCGATGATCCGCAGAATATTCCAGAAGGGATGTCTCTTGGTGAAGCAAACATAGCACCACAAGCACCCTTCATCATTTTCTCTGTCTTTGATTCCGTTGCGCTGTTTATCTCTCTTGCTGTTGTTGTGGTGCAAACCTCGGTTGTGGTAATAGAAAGCAAGGCGAAGAAACAGATGATGGCTATAATTAACAAGCTCATGTGGCTGGCTTGTGTGCTTATTTCGGTGGCATTCTTGGCATTGTCGTTTGTTGTTGTCGGGAAGGAAGAGAAGTGGCTGGCGGTTGGAGTGACAGTTATAGGGACAACCATAATGGCTACGACGTTGGGGACTATGTGTTATTGGGTCATTAAGCACCGCATTGAGGCCTCGAATTTGAGGAACGTAAGGAAATCTTCGATAGAAAGCAGGTCAAAGTCTTTTTCAGTGACGGCTTTCTCAGACTCTGAGCTACTTAACAATGAGTATAAGAAAATGTATGCGATTTAG 1638 0.4731 MNPMATPAVQQASTPRKKMTTQLTGKRDDTPLHAAARAGNLAVLREIFTGTEVDELREILARQNQDGETALFVAAEYGDVDVVREMIQYYDLVDAGIKARNGFDALHVAAKQGDLNVLKILMEAHPELSMTVDPSNTTALHTAATQGHIEIVKFLLEEGSSLASIAKSNGKTALHSAARNGHLEVVKALLEQNAGIATRTDKKGQTALHMAVKGQSLEVVEELIKADPSSINMVDTKGNTALHIATRKGRAKIVNKLLEQKETNTSAVNRSGETAVDTAEKTGNHHVKSILLEHGVQSAKAMKPQGPTATARELKQTVSDIKHEVHHQLEHTRQTRKRVQGIAKRINKMHAEGLNNAINSNTVVAVLIATVAFAAIFTVPGQFVDDPQNIPEGMSLGEANIAPQAPFIIFSVFDSVALFISLAVVVVQTSVVVIESKAKKQMMAIINKLMWLACVLISVAFLALSFVVVGKEEKWLAVGVTVIGTTIMATTLGTMCYWVIKHRIEASNLRNVRKSSIESRSKSFSVTAFSDSELLNNEYKKMYAI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1678 545 ProSiteProfiles Ankyrin repeat profile. 203 225 IPR002110 GO:0005515
Dod10g1678 545 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1678 545 Gene3D - 163 340 IPR036770 -
Dod10g1678 545 ProSiteProfiles Ankyrin repeat profile. 135 167 IPR002110 GO:0005515
Dod10g1678 545 Pfam Domain of unknown function 352 468 IPR026961 -
Dod10g1678 545 Gene3D - 8 162 IPR036770 -
Dod10g1678 545 Pfam Ankyrin repeats (3 copies) 27 89 IPR002110 GO:0005515
Dod10g1678 545 Pfam Ankyrin repeats (3 copies) 94 161 IPR002110 GO:0005515
Dod10g1678 545 Pfam Ankyrin repeats (3 copies) 169 232 IPR002110 GO:0005515
Dod10g1678 545 ProSiteProfiles Ankyrin repeat profile. 101 133 IPR002110 GO:0005515
Dod10g1678 545 ProSiteProfiles Ankyrin repeat profile. 237 270 IPR002110 GO:0005515
Dod10g1678 545 ProSiteProfiles Ankyrin repeat region circular profile. 169 196 - -
Dod10g1678 545 PANTHER ANKYRIN REPEAT PLANT PROTEIN 8 545 - -
Dod10g1678 545 SUPERFAMILY Ankyrin repeat 31 296 IPR036770 -
Dod10g1678 545 SMART ANK_2a 101 130 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 237 267 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 169 198 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 271 301 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 66 95 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 203 233 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 27 55 IPR002110 GO:0005515
Dod10g1678 545 SMART ANK_2a 135 164 IPR002110 GO:0005515
Dod10g1678 545 ProSiteProfiles Ankyrin repeat profile. 169 201 IPR002110 GO:0005515
Dod10g1678 545 ProSiteProfiles Ankyrin repeat region circular profile. 101 123 - -
Dod10g1678 545 ProSiteProfiles Ankyrin repeat region circular profile. 237 259 - -
Dod10g1678 545 MobiDBLite consensus disorder prediction 1 27 - -
Dod10g1678 545 ProSiteProfiles Ankyrin repeat region circular profile. 135 162 - -
Dod10g1678 545 ProSiteProfiles Ankyrin repeat region circular profile. 203 225 - -
Dod10g1678 545 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 8 545 - -
Dod10g1678 545 Pfam Ankyrin repeat 238 269 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1678 Dod-Chr10 37916444 37918876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1678 9 545 Miscellaneous Gene Families AT1G07710 74.115 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1678 - - gmx:100779230 904.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1678 10 37916444 37918876 Dod10g1678 10 37916444 37918876 ECH
Dod10g1678 10 37916444 37918876 Dod03g2873 03 60813078 60816896 ECH