Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1643 ATGGGAAACAGAACCACACTTTTGGTATTGTTCCTTGTTCTCTGTCATGGCCTGGCTGTGACAATGGGGTTATGGAGGAATGATGAGAAGGACGAGAGAAAAGAGGAGGCTACAAAGTCGGACAAGATGTTCATGATGATGAATTCCAAGCGTGTGGTGAAGACTGATGCAGGGGAGATGAGAGTTCTTAAGAGCTACGGTGGTAAGATTATGGAGAGGCACTTGCACATTGGCTTCATCACTATGGAACCAAGGTCCCTCTTCATTCCTCAGTACCTTGACTCCAGCTTGATCATGTTCTTGCGTCGAGGGGAAGCAAAGGTAGGATTGATGTATAAAGGTAAGCTCGCTGAAAGACGATTGAAGATGGGGGATGTGTATAGAATCCCAGCTGGTTCAGCATTCTATTTGGTGAATATGGGGCATACACTTAACATCATCTGCAGCATTGACCCCTCTGAGAGCATGGGAATAGGTACATTCCAGTCCTTCTATATTGGAGGAGGAACCAATCCAGCTTCAGTACTTTCTGGCTTTGAGCCTGAAATCCTAGAATCTGCCTTTAATGTATCAGGAGCAGAACTAAAAAAAATCTTCACTAGGCAACATGAGGGCCCAATTGTGCATGTGGGTGATTCACATGGCACAAGTCTATGGACCAAATTCCTTCACCTCAAGGATGAGGACAAGCTGCAACGCATGAAGAAAATGGTGCTAGACCAAGGGGAATTCGATGATGATGATGATGATGATGAAGAAGAAGAGAAGCAAAGAAGATGGTCATGGAGGAAGCTCTTGGACTCTGTGCTTTGTAATGAGAAGAACAAGGCATGGGACAAGGTTATCCATCATAAATCCCCTCACTCTTACAACATTTTTGACAGAAAACCAGATTTCATCAACAATCATGGTTGGAGCGTTACATTGGACGGCTCTGATTATCATCCACTCAAAGCATCTGGCGTTGGCATTTACCACGTCAATCTCTCAGCGGGAGCCATGATGACACCTCACTTGAATCCAAGGGCAACAGAGTATGGCATAGTGTTGAATGGGAGTGGTAGAATCCAAATTGTGTTTCCAAACGGAAGCAATGCAATGGACACACGCATAAAGGAAGGGGACGTTTTCTTTGTGCCAAGGTACTTCCCAATATGCCAAATAGCATCAGGGAACGAGTCCTTAGAGTTCTTTGGTTTCACAACCTCTGCTAGGAAGAACAGGCCACAGTTCCTGGTGGGTGCCACGTCACTAATGAAGACCATGATGGGGCCTGAGCTTGCTGCTGCTTTTGATGTGAGCGAGGACGCCATGAAGCGCATGGTTAATGCACAGCATGAGGCAGTGATACTGCCAACTCCATGGTCTGCACATGCAGGAGAACACTTCAAGAAGGAGGATGTGGTGGAGAGCAAGAGTACTATTCCAAACCTTATAAGGAACGGCATGATGATGGGGTTTTGA 1464 0.459 MGNRTTLLVLFLVLCHGLAVTMGLWRNDEKDERKEEATKSDKMFMMMNSKRVVKTDAGEMRVLKSYGGKIMERHLHIGFITMEPRSLFIPQYLDSSLIMFLRRGEAKVGLMYKGKLAERRLKMGDVYRIPAGSAFYLVNMGHTLNIICSIDPSESMGIGTFQSFYIGGGTNPASVLSGFEPEILESAFNVSGAELKKIFTRQHEGPIVHVGDSHGTSLWTKFLHLKDEDKLQRMKKMVLDQGEFDDDDDDDEEEEKQRRWSWRKLLDSVLCNEKNKAWDKVIHHKSPHSYNIFDRKPDFINNHGWSVTLDGSDYHPLKASGVGIYHVNLSAGAMMTPHLNPRATEYGIVLNGSGRIQIVFPNGSNAMDTRIKEGDVFFVPRYFPICQIASGNESLEFFGFTTSARKNRPQFLVGATSLMKTMMGPELAAAFDVSEDAMKRMVNAQHEAVILPTPWSAHAGEHFKKEDVVESKSTIPNLIRNGMMMGF* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1643 487 CDD cupin_7S_vicilin-like_N 52 210 - -
Dod10g1643 487 Gene3D Jelly Rolls 282 454 IPR014710 -
Dod10g1643 487 PANTHER OS03G0336100 PROTEIN-RELATED 1 461 - -
Dod10g1643 487 CDD cupin_7S_vicilin-like_C 297 448 - -
Dod10g1643 487 SMART Cupin_1_3 44 196 IPR006045 -
Dod10g1643 487 SMART Cupin_1_3 290 439 IPR006045 -
Dod10g1643 487 SUPERFAMILY RmlC-like cupins 2 448 IPR011051 -
Dod10g1643 487 Pfam Cupin 290 437 IPR006045 -
Dod10g1643 487 Pfam Cupin 50 194 IPR006045 -
Dod10g1643 487 PANTHER OS03G0336100 PROTEIN 1 461 - -
Dod10g1643 487 Gene3D Jelly Rolls 32 221 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1643 Dod-Chr10 37381610 37385021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1643 52 458 Miscellaneous Gene Families AT2G18540 28.873 3.97e-46 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1643 - - gmx:100818796 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1643 10 37381610 37385021 Dod10g1643 10 37381610 37385021 ECH
Dod10g1643 10 37381610 37385021 Dod03g2832 03 60166868 60170324 PCT