Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2832 ATGGGAAATATAACCACCACCCTTTTGTTCCTATTGCTTGTTCTTTGCCATGGAGTGGCCATAACAATGGGATTTTTCAAAGATGATGGTGATGATTGGGGGGCAGAGTCGGAGAGGAGAGGGGAGAGTACTACTCCTTCAAGTTTGTTCTTGATGCACAACTCCAAGAGTGTGGTCAAGACAGATGCTGGGGAGATGAGGGTGCTTAGGAGTTATGGTGGTAGGAGCTTGGAGAGGCGCTTGCACATTGGCTTCATCAATATGGAACCAAGGTCCTTGTTCATTCCTCAGTACCTCGACTCCAATTTGATCATGTTCATCCGTAGAGGGGAAGCAAAATTGGGATTCATTTATAAGGATAAACTAGCAGAAAGAAGATTGAAGGTAGGGGATGTGTACCTAATTCCAGCAGGTTCTCCATTCTATTTGGTTAATGTAGGGGAGGGTCAGAGACTCCACATCATCTGCAGCATTAGCCCCTCTGACAGATTTGGAATAGACACCTTCCATTCCTTCTCTATTGGTGGAGCCAGTCCACATTCAGTGCTTTCTGGATTCGAGCCTGTGATCCTTGAGGCTGCATTGAATGTTTCAAGAAGGGATGTAGAGAGAATCCTCACCACTCAACTAGATGGGCCAATTGTGCATGTGGGTGATTCTCATGCCCCTAGCCTATGGACCAAATTCCTTCAAATGAAGAAGGAAGATAAAGTGGAACACATGAAGAAAATGGTGCAAGATCAAGAAGAACACGATGAAGAGGAAGAAGAGCAAACAAGTTGGTCATGGAGGAAGCTATTGAATAATGTATTTGGAAAGGAGAACAAGAAGTCAGATGATAAAAAGGGCACCGGTGATTCTCCTGATCCATGCAACTTATATGATAGAAAACCAGATTTCAGAAACGATTATGGTCATAGCATTGCACTGGATGGTGACGATTACCATCCACTCAAACTTGCTGGCATTGGCGTTTACCTTGTCAATCTCACAGCGGGATCGATGATGGCACCGCACGTGAATCCAAGGGCAACAGAGTATGGGATAGTGCTGCGTGGGTCAGGCACAATCCAGATAGTGTTCCCAAACGGAACCATCGCTATGAACACCGAAATCAAAGAGGGCGACGTGTTCTTCGTCCCTAGATTCTACCCCTTCTGCCAGATAGCTTCCAGGACGGGGCCCAGCTTGGAGTTCTTCGGCTTCACCACCTCAGCCATGAACAACAGCCCGCAGTTCCTCGTGGGCGCTTCCTCCGTCATGAGGACCATGATGGGACCAGAACTCGCTGCTGGTTTCGGAGTCACCGAGGAAACCATGCGGCGTGTCGTTGCTTCTCAGAAAGAGGCTGTCATACTGCCTTCCACGTGGGCTGCTCCACCCGCTGATAATCTCGAGAAGGAGAAGCCTAACGCTGCTGCTACTATCAAGGGTTTTGCTAATGATTTGGTTTTGGATGTTGTTGATGTTTAG 1473 0.4739 MGNITTTLLFLLLVLCHGVAITMGFFKDDGDDWGAESERRGESTTPSSLFLMHNSKSVVKTDAGEMRVLRSYGGRSLERRLHIGFINMEPRSLFIPQYLDSNLIMFIRRGEAKLGFIYKDKLAERRLKVGDVYLIPAGSPFYLVNVGEGQRLHIICSISPSDRFGIDTFHSFSIGGASPHSVLSGFEPVILEAALNVSRRDVERILTTQLDGPIVHVGDSHAPSLWTKFLQMKKEDKVEHMKKMVQDQEEHDEEEEEQTSWSWRKLLNNVFGKENKKSDDKKGTGDSPDPCNLYDRKPDFRNDYGHSIALDGDDYHPLKLAGIGVYLVNLTAGSMMAPHVNPRATEYGIVLRGSGTIQIVFPNGTIAMNTEIKEGDVFFVPRFYPFCQIASRTGPSLEFFGFTTSAMNNSPQFLVGASSVMRTMMGPELAAGFGVTEETMRRVVASQKEAVILPSTWAAPPADNLEKEKPNAAATIKGFANDLVLDVVDV* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2832 490 Pfam Cupin 292 440 IPR006045 -
Dod03g2832 490 Pfam Cupin 58 198 IPR006045 -
Dod03g2832 490 MobiDBLite consensus disorder prediction 240 260 - -
Dod03g2832 490 CDD cupin_7S_vicilin-like_C 298 450 - -
Dod03g2832 490 SUPERFAMILY RmlC-like cupins 49 450 IPR011051 -
Dod03g2832 490 SMART Cupin_1_3 50 203 IPR006045 -
Dod03g2832 490 SMART Cupin_1_3 291 441 IPR006045 -
Dod03g2832 490 CDD cupin_7S_vicilin-like_N 58 217 - -
Dod03g2832 490 Gene3D Jelly Rolls 294 460 IPR014710 -
Dod03g2832 490 PANTHER OS03G0336100 PROTEIN 6 463 - -
Dod03g2832 490 PANTHER OS03G0336100 PROTEIN-RELATED 6 463 - -
Dod03g2832 490 Coils Coil 237 258 - -
Dod03g2832 490 MobiDBLite consensus disorder prediction 274 296 - -
Dod03g2832 490 Gene3D Jelly Rolls 40 234 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2832 Dod-Chr3 60166868 60170324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2832 57 459 Miscellaneous Gene Families AT2G18540 30.435 1.05e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2832 - - gmx:100818796 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2832 03 60166868 60170324 Dod03g2832 03 60166868 60170324 ECH
Dod10g1643 10 37381610 37385021 Dod03g2832 03 60166868 60170324 PCT