Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1619 ATGCGAATCTTCGTTCTCCTTTCCCTCACTTCCCTCCTCGTCTTCTCCTCCTTCTCAACCACTCTCTCCAAGGACTCCGCCGCCACCAACGGCGGCGACCACGACGACGAAGATCTCAGTTTCCTCGAAGAGCCCGATGAAACCTCCGCGTCGGACCACCACGGCCACTATCCGGATCCGGACCAAATCGACGACGACGATCTCGAGGACTTCTCCGGCTTCGACGAGACGCAGTACAATCCTGACGCCTACAAGGAGCCAGAGGTTGACGACAAGGACGTCGTCGTTTTGAAGGACAAGAACTTCACCGACGTCGTCAAGAACAACCGGTTCGTCATGGTTGAGTTCTACGCGCCTTGGTGCGGCCACTGCCAGGCCTTGGCTCCCGAGTACGCCGCCGTCGCAACGGAGCTGAAGGGCGAGAACGTCATTTTAGCGAAGGTTGATGCCACGGAGGAGAACGACTTGGCGCAGGAGTACGATATCCAGGGTTTCCCCACTGTGTACTTCTTCATCGATGGAGTTCACAAGCCTTACAATGGCCTCAGAACCAAAGATGCTATAGTGAGCTGGATCAAGAAGAAGATAGGGCCTGGTATTCACAACATTACTACAGTGGAGGATGCTGAGCGCATTTTGACTTCTGAAAGCAAAGTTGTTTTAGGATTCCTCAACTCTTTAGTTGGTCCTGAGAGTGAGGAGCTGGCTGCCGCTTCAAGACTTGAGGATGATGTCACTTTCTATCAAACCGTGAATCCTGATGTGGCGAAGCTTTTCCATATTGACCCAAATGTTAAACGCCCTGCTTTGATCCTGATCAAGAGGGAGGAGGAAAAACTAAACCATTATGATGGCCAATTTGTTAAGTCTGCAATAGCGGAATTTGTATTCTCCAACAAGCTTCCTTTGGTTACAATTTTTTCAAGAGAAAGTGCACCATCAGTCTTCGAAAATCCAATCAAGAAACAGATGTTGCTGTTTGTCACTTCAAATGATTCAGAGAAGTTCCTCCCAGTATTTCAAGAAGCAGCAAAATTTTTCAAGGGGAAGCTGATCTTTGTGTATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTTTCAGATTACTTTGGTATCTCTGGGAATGCTCCAAAAGTACTCGGATACACTGGAAATGATGATGGAAAAAAATTTGTGCTTGATGGAGAGATGACTGTTGACAAAATTAAGGAATTTGGGGAAGATTTCCTTCAAGACAAGCTAAAACCTTTCTACAAGTCAGATCCAGTTCCAGAAAGTAATGATGGTGATGTGAAAATAGTTGTTGGGAATAACTTTGATGAAATTGTCTTGGATGAGTCAAAGGATGTTCTCCTTGAGATTTATGCTCCCTGGTGTGGCCATTGCCAAGCTCTGGAACCAACATACAGCAAACTTGCAAAACATCTTCGTGGTATTGAGTCTATTGTTATAGCGAAGATGGATGGAACAACAAATGAGCATCCTAGGGCAAAGTCTGATGGATTCCCCACACTTCTGTTCTTCCCGGCAGGAAACAAGAGTTTTGACCCTATTACTGTTGATACAGATCGTACAGTGGTAGCATTTTACAAGTTCCTCAAGAAACATGCATCAGTCCCATTCAAGCTCCAGAAACCAACCTCAACTTCTAAGCCCGAAAGCACTGATACCAAGGAGAGTTCTGATGCCAAGGAGAGCAAGAGTAGCAGTAGCGATGTGAAGGATGAATTATGA 1737 0.4617 MRIFVLLSLTSLLVFSSFSTTLSKDSAATNGGDHDDEDLSFLEEPDETSASDHHGHYPDPDQIDDDDLEDFSGFDETQYNPDAYKEPEVDDKDVVVLKDKNFTDVVKNNRFVMVEFYAPWCGHCQALAPEYAAVATELKGENVILAKVDATEENDLAQEYDIQGFPTVYFFIDGVHKPYNGLRTKDAIVSWIKKKIGPGIHNITTVEDAERILTSESKVVLGFLNSLVGPESEELAAASRLEDDVTFYQTVNPDVAKLFHIDPNVKRPALILIKREEEKLNHYDGQFVKSAIAEFVFSNKLPLVTIFSRESAPSVFENPIKKQMLLFVTSNDSEKFLPVFQEAAKFFKGKLIFVYVEMDNEDVGKPVSDYFGISGNAPKVLGYTGNDDGKKFVLDGEMTVDKIKEFGEDFLQDKLKPFYKSDPVPESNDGDVKIVVGNNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYSKLAKHLRGIESIVIAKMDGTTNEHPRAKSDGFPTLLFFPAGNKSFDPITVDTDRTVVAFYKFLKKHASVPFKLQKPTSTSKPESTDTKESSDAKESKSSSSDVKDEL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1619 578 ProSitePatterns Thioredoxin family active site. 452 470 IPR017937 -
Dod10g1619 578 TIGRFAM ER_PDI_fam: protein disulfide isomerase 92 578 IPR005792 GO:0003756
Dod10g1619 578 Gene3D Glutaredoxin 301 425 - -
Dod10g1619 578 SUPERFAMILY Thioredoxin-like 87 197 IPR036249 -
Dod10g1619 578 CDD PDI_b_family 200 299 - -
Dod10g1619 578 TIGRFAM pdi_dom: protein disulfide-isomerase domain 97 195 IPR005788 GO:0003756
Dod10g1619 578 ProSitePatterns Thioredoxin family active site. 113 131 IPR017937 -
Dod10g1619 578 PRINTS Thioredoxin family signature 120 129 - -
Dod10g1619 578 PRINTS Thioredoxin family signature 112 120 - -
Dod10g1619 578 PRINTS Thioredoxin family signature 161 172 - -
Dod10g1619 578 PANTHER PROTEIN DISULFIDE ISOMERASE 2 558 - -
Dod10g1619 578 Pfam Thioredoxin 94 194 IPR013766 -
Dod10g1619 578 Pfam Thioredoxin 432 517 IPR013766 -
Dod10g1619 578 SUPERFAMILY Thioredoxin-like 202 311 IPR036249 -
Dod10g1619 578 ProSiteProfiles Thioredoxin domain profile. 409 539 IPR013766 -
Dod10g1619 578 CDD PDI_b'_family 321 411 - -
Dod10g1619 578 MobiDBLite consensus disorder prediction 556 578 - -
Dod10g1619 578 MobiDBLite consensus disorder prediction 544 578 - -
Dod10g1619 578 MobiDBLite consensus disorder prediction 46 61 - -
Dod10g1619 578 MobiDBLite consensus disorder prediction 23 85 - -
Dod10g1619 578 SUPERFAMILY Thioredoxin-like 299 429 IPR036249 -
Dod10g1619 578 Pfam Thioredoxin-like domain 235 406 - -
Dod10g1619 578 Gene3D Glutaredoxin 83 196 - -
Dod10g1619 578 CDD PDI_a_family 95 192 - -
Dod10g1619 578 Gene3D Glutaredoxin 197 300 - -
Dod10g1619 578 SUPERFAMILY Thioredoxin-like 427 539 IPR036249 -
Dod10g1619 578 ProSiteProfiles Thioredoxin domain profile. 74 197 IPR013766 -
Dod10g1619 578 CDD PDI_a_PDI_a'_C 432 534 - -
Dod10g1619 578 PANTHER PROTEIN DISULFIDE-ISOMERASE 2 558 - -
Dod10g1619 578 Gene3D Glutaredoxin 426 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1619 Dod-Chr10 37124681 37129078 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1619 K09580 - gmx:100170706 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1619 10 37124681 37129078 Dod10g1619 10 37124681 37129078 ECH
Dod10g1619 10 37124681 37129078 Dod03g2802 03 59872072 59876544 ECH
Dod10g1619 10 37124681 37129078 Dod03g2802 03 59872072 59876544 PCT