Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2802 ATGGCAAGTCGTAGACGACTCGTCGTTTTGCTCTCCCTCACCACTCTCCTCCTCCTCTCCTCCTTCTCCCCCCTCACCCTCAGCGAGAAAGCCCCACAAAACGACAACACCCCCGACGAAAACGACGACGAAGATCTCAGCTTCCTCGACGAACCCGACGCCACCACCACCACCGCCGCACACCACCACTTCCCAGATCCCGACGACCATAACGACGACGATGACGCCGACGATGACGACGATTTCGGCGACTTCTCCGGCTACCCCGACTCACAACACGACGAAGACTCGCACGATAGCGAACCCGCTATTGACGATAAAGACGTCGTCATTTTGAAGGAGCGTAACTTCACGACCGTGGTGGAGAACAACCCCTACGTGATGGTGGAATTCTACGCGCCGTGGTGCGGACACTGCAAGGCACTGGCGCCTGAGTACGCCGCCGCCGCCACGGAGCTGAAGGCAGACGGCGTCGTTCTGGCGAAGGTGGACGCCACGGTGGAGCACGAGCTGGCTCACGAGTACGATGTTCAGGGATTCCCCACTGTCTTCTTCTTCGTCGATGGAGTTCACAAGCCTTACACTGGCCACAGGACCAAGGATGCTATAGTGACTTGGATTAGGAAGAAGATAGGGCCTGGTATGTATAACATTACTAAGTTGGATGATGCTGAACGCGTTTTGACATCTGAGAGTAAAGTTGTTTTGGCGTTCCTTGACTCTTTAGTTGGTGCTGAGAGTGAGGAGCTAGCTGCTGCGTCTAAACTTGAGGATGATGTCAATTTTTATCAAACTGTGGCTCCTGATGTGGCAAAGCTTTTCCATATTGACCCAAATGCTAAACGCCCTGCTTTGGTTTTGCTCAAGAAGGAGGAGGAGAAACTCAACTATTTTGATGGTCAGTTTGTAAAATCTGCAATAGCAGACTTTGTATCCTCCAACAAGCTTCCTTTGGTTACAACTTTCACAAGAGAAAGTGCCCCATCAATCTTTGAAAGTCAGATCAAGAAACAGCTGATGCTGTTTGTGACTTCAAATGATTCAGAGAAGGTCATCCTCGTATTTCAAGAAGCAGCAAAATTTTTCAAGGGGAAGCTGATCTTTGTTCATGTGGAAATGGATAATGAAGATGTTGGAAAGCCTGTAGCAGAATATTTTGGCATCACAGGGAATGCTCCCAAAGTACTTGCATGCACTGGAAATGATGATGGAAGAAAATTTTTACATGATGGTGAAGTGACTGTTGATAAAATTAAGGTATTTGGTAAAGATTTCCTTGAAGACAAGCTGAAACCTTTCCTCAAGTCAGACCCAGTTCCTGAAACTAATGATGGTGTTGTGAAAATTGTTGTTGGGGATAACTTTGATGAAATTGTCTTGGATGAGTCGAAGGATGTTCTCCTTGAGATTTATGCTCCCTGGTGTGGCCACTGCCAAGCACTGGAACCAACATACAACAAGCTTGCAAAGCATCTTCGTGGGATTGATTCTATTGTAATAGCCAAGATGGATGGTACAACAAATGAGCATCCCAGGGCAAAGGCCGATGGATTCCCCACACTTGTCTTCTACCCAGCTGGAAAAAAGAGTTCTGACCCTATTACTGTTGATGCGGATCGTACAGTGGTAGCCTTTTATAAGTTCCTCAGGAAGCATGCATCAATCCCATTCAAGCTCCAGAAACCAACCTCAGCTTCTAAAACCGAGAGTTCTGATGTCAAGGAGAGCCAGGGTAGTAGTGGTAGTAGTAGTAGTAGTACCGACCTGAAGGATGAACTATGA 1782 0.477 MASRRRLVVLLSLTTLLLLSSFSPLTLSEKAPQNDNTPDENDDEDLSFLDEPDATTTTAAHHHFPDPDDHNDDDDADDDDDFGDFSGYPDSQHDEDSHDSEPAIDDKDVVILKERNFTTVVENNPYVMVEFYAPWCGHCKALAPEYAAAATELKADGVVLAKVDATVEHELAHEYDVQGFPTVFFFVDGVHKPYTGHRTKDAIVTWIRKKIGPGMYNITKLDDAERVLTSESKVVLAFLDSLVGAESEELAAASKLEDDVNFYQTVAPDVAKLFHIDPNAKRPALVLLKKEEEKLNYFDGQFVKSAIADFVSSNKLPLVTTFTRESAPSIFESQIKKQLMLFVTSNDSEKVILVFQEAAKFFKGKLIFVHVEMDNEDVGKPVAEYFGITGNAPKVLACTGNDDGRKFLHDGEVTVDKIKVFGKDFLEDKLKPFLKSDPVPETNDGVVKIVVGDNFDEIVLDESKDVLLEIYAPWCGHCQALEPTYNKLAKHLRGIDSIVIAKMDGTTNEHPRAKADGFPTLVFYPAGKKSSDPITVDADRTVVAFYKFLRKHASIPFKLQKPTSASKTESSDVKESQGSSGSSSSSTDLKDEL* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2802 593 Pfam Thioredoxin 109 209 IPR013766 -
Dod03g2802 593 Pfam Thioredoxin 447 532 IPR013766 -
Dod03g2802 593 CDD PDI_b'_family 326 426 - -
Dod03g2802 593 PRINTS Thioredoxin family signature 127 135 - -
Dod03g2802 593 PRINTS Thioredoxin family signature 176 187 - -
Dod03g2802 593 PRINTS Thioredoxin family signature 135 144 - -
Dod03g2802 593 CDD PDI_a_PDI_a'_C 446 549 - -
Dod03g2802 593 CDD PDI_b_family 217 314 - -
Dod03g2802 593 SUPERFAMILY Thioredoxin-like 443 554 IPR036249 -
Dod03g2802 593 SUPERFAMILY Thioredoxin-like 217 326 IPR036249 -
Dod03g2802 593 PANTHER PROTEIN DISULFIDE-ISOMERASE 4 577 - -
Dod03g2802 593 TIGRFAM pdi_dom: protein disulfide-isomerase domain 113 210 IPR005788 GO:0003756
Dod03g2802 593 Pfam Thioredoxin-like domain 250 422 - -
Dod03g2802 593 Gene3D Glutaredoxin 212 315 - -
Dod03g2802 593 CDD PDI_a_family 110 207 - -
Dod03g2802 593 PANTHER PROTEIN DISULFIDE ISOMERASE 4 577 - -
Dod03g2802 593 ProSitePatterns Thioredoxin family active site. 128 146 IPR017937 -
Dod03g2802 593 MobiDBLite consensus disorder prediction 70 85 - -
Dod03g2802 593 ProSitePatterns Thioredoxin family active site. 467 485 IPR017937 -
Dod03g2802 593 ProSiteProfiles Thioredoxin domain profile. 76 212 IPR013766 -
Dod03g2802 593 TIGRFAM ER_PDI_fam: protein disulfide isomerase 107 572 IPR005792 GO:0003756
Dod03g2802 593 MobiDBLite consensus disorder prediction 560 593 - -
Dod03g2802 593 SUPERFAMILY Thioredoxin-like 314 444 IPR036249 -
Dod03g2802 593 SUPERFAMILY Thioredoxin-like 103 212 IPR036249 -
Dod03g2802 593 MobiDBLite consensus disorder prediction 27 105 - -
Dod03g2802 593 Gene3D Glutaredoxin 316 440 - -
Dod03g2802 593 Gene3D Glutaredoxin 98 211 - -
Dod03g2802 593 ProSiteProfiles Thioredoxin domain profile. 425 554 IPR013766 -
Dod03g2802 593 MobiDBLite consensus disorder prediction 560 587 - -
Dod03g2802 593 MobiDBLite consensus disorder prediction 86 105 - -
Dod03g2802 593 Gene3D Glutaredoxin 441 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2802 Dod-Chr3 59872072 59876544 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2802 K09580 - gmx:100785630 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2802 03 59872072 59876544 Dod03g2802 03 59872072 59876544 ECH
Dod10g1619 10 37124681 37129078 Dod03g2802 03 59872072 59876544 ECH
Dod10g1619 10 37124681 37129078 Dod03g2802 03 59872072 59876544 PCT