Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1574 ATGCCATCATCACTTCCCTCTTTCCTCCATATGGCTCCTGTCTTCTCTCTTTTCTTCTCACTCATGATTTGTAGTAGCATTGCTGAGGGTCCACCTTCACCTGGCTACTACCCTAGCTCCAAAATCAGTCCTGTTAGATTTGATAAAGGATTTAGAAACCTTTGGGGACCTCAGCATCAGAAACTAGACCAGGGCTCATTAACAATCTGGCTTGACTCTGACTCAGGGAGTGGATTCAAGTCACTTCATTCGTATCGATCTGGGTACTTTGGTGCTGCCATTAAGGTTCAACCTGGTTATACAGCAGGAGTCAACACATGTCTCTACCTTTCAAACAACCAAGACTACCCGGGAAGCCATGATGAAGTTGACCTTGAGTTCCTTGGCACCACCCCAGATAAGCCATATGTCTTGCAGACAAATGTGTTCATGAGAGGAAGTGGAGATAGCAAGGTTATAGGTAGAGAGATGAGGTTTCACCTATGGTTCGACCCAACACAAGATTTTCACAACTATGCTATTCTATGGAAACCCAGTGAGATCATATTTTTAGTGGATGATGTCCCCATAAGGAGGTATCCTAGGAAGAGTGATGCAACATTCCCTGCAAGGCCAATGTATGTGTACGGATCAATATGGGATGCATCTTCCTGGGCTACAGAGAATGGAAAATACAAGGCTGATTACAAATACCAACCATTCATTGGTAGATACAAAAACTTCAAGCTGCAAGGTTGCACCACTGAAGCCTCCAACTCATGCCAGCCACCCTCAGCCTCACCACCTGGCTATAGCAGCCTAAGCCCTCAGCAGCAAGCTGCAATGCAATGGGTCCAAAACAATTACGTGGTCTATGACTATTGCCATGATCCTAGTAGAGACCATACACTTACTCCCGAATGCTAA 906 0.4525 MPSSLPSFLHMAPVFSLFFSLMICSSIAEGPPSPGYYPSSKISPVRFDKGFRNLWGPQHQKLDQGSLTIWLDSDSGSGFKSLHSYRSGYFGAAIKVQPGYTAGVNTCLYLSNNQDYPGSHDEVDLEFLGTTPDKPYVLQTNVFMRGSGDSKVIGREMRFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATFPARPMYVYGSIWDASSWATENGKYKADYKYQPFIGRYKNFKLQGCTTEASNSCQPPSASPPGYSSLSPQQQAAMQWVQNNYVVYDYCHDPSRDHTLTPEC* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1574 301 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 26 238 IPR000757 GO:0004553|GO:0005975
Dod10g1574 301 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 14 301 IPR044791 GO:0004553
Dod10g1574 301 PIRSF EndGlu_transf 9 301 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod10g1574 301 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 265 301 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod10g1574 301 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 301 IPR013320 -
Dod10g1574 301 Pfam Glycosyl hydrolases family 16 48 230 IPR000757 GO:0004553|GO:0005975
Dod10g1574 301 Gene3D - 27 301 - -
Dod10g1574 301 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 14 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1574 Dod-Chr10 36457511 36460054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1574 9 301 Glycoside Hydrolase AT3G44990 65.188 9.96e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1574 K08235 - gmx:100781528 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1574 10 36457511 36460054 Dod10g1574 10 36457511 36460054 ECH
Dod10g1574 10 36457511 36460054 Dod03g2732 03 58974394 58977885 PCT