Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2732 ATGCCATCATCACTAACCTCTTTACTCCATATGTCTCCTCTCTTCTCCCTTCTTGTACTCTCAATCATGACTGGTTCTTCTAGTGCTCAGGGTCCACCTTCGCCTGGATACTACCCCAGTTCCAAATTTAGTCCTGTTAGTTTTGATCAAGGGTTTAGAAACCTCTGGGGACCTCAGCATCAGAGGCTGGACCAAGACTCATTGACAATATGGCTTGACTCTAACTCAGGGAGTGGATTCAAGTCGCTTCACTCTTATCAATCTGGATACTTTGGTGCTGCAATTAAGCTTCAACCTGGTTACACTGCAGGAGTGATTACATCTCTCTACCTTTCAAACAACCAAGACCACCCGGGAAACCATGATGAAATTGACATTGAGTTCCTTGGTACCACCCCGGATAAGCCTTATGTCCTGCAGACAAATGTATACATCAGAGGAAGTGGAGATGGGAATATTGTAGGCAGGGAGATGAAGTTTCATCTGTGGTTCGACCCTACACAAGATTTTCACAACTATGCTGTTCTGTGGAAACCCAGTGAGATAATATTTTTTGTGGATGATGTCCCCATAAGGAGGTACCCTAGGAAGAGTGATGCTACATACCCTACAAGACCAATGTATGTGTACGGATCAATATGGGATGCATCTTCATGGGCAACAGAGGATGGAAAATACAAAGCTGATTATACATACCAACCCTTCTATGGTAAGTACAAAAACTTCAAGCTTCAAGGCTGTACCACTGAAAGCCCTTCCTCATGCCAGCCACCATCTGCTTCACCATCTGGTTATGCAAGTTTAAGCCCTCAGCAACTTGCAGCCATGCAATGGGTCCAAAACAATTACTTGGTCTACTATTATTGCCATGACCCTAGGAGAGACCAGAGTCTTACCCCAGAGTGCTAG 909 0.4466 MPSSLTSLLHMSPLFSLLVLSIMTGSSSAQGPPSPGYYPSSKFSPVSFDQGFRNLWGPQHQRLDQDSLTIWLDSNSGSGFKSLHSYQSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIVGREMKFHLWFDPTQDFHNYAVLWKPSEIIFFVDDVPIRRYPRKSDATYPTRPMYVYGSIWDASSWATEDGKYKADYTYQPFYGKYKNFKLQGCTTESPSSCQPPSASPSGYASLSPQQLAAMQWVQNNYLVYYYCHDPRRDQSLTPEC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2732 302 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 14 302 - -
Dod03g2732 302 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 27 239 IPR000757 GO:0004553|GO:0005975
Dod03g2732 302 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 14 302 IPR044791 GO:0004553
Dod03g2732 302 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 265 302 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod03g2732 302 PIRSF EndGlu_transf 9 302 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod03g2732 302 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 302 IPR013320 -
Dod03g2732 302 Gene3D - 28 302 - -
Dod03g2732 302 Pfam Glycosyl hydrolases family 16 49 231 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2732 Dod-Chr3 58974394 58977885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2732 14 302 Glycoside Hydrolase AT3G44990 67.820 2.21e-145 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2732 K08235 - gmx:100781528 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2732 03 58974394 58977885 Dod03g2732 03 58974394 58977885 ECH
Dod10g1574 10 36457511 36460054 Dod03g2732 03 58974394 58977885 PCT