Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1519 ATGCAGACTGTTTCGCAGCCCACTTCCAACACCCTCAACCATATCTTGCGGCCACGGGCCTCACCTACCCGGGTCGCCCCGACCCGAATCTCCGTCAAATGCGCTTACGGCTCCGAACCCGCCAGCCTTGGAATCGGCTCTAACCGAGCCGATTGGCAGAGCTCCTGCGCCATCCTATCCAGCAACGTCGTCTCCCAGCAGAAACAATCCTCCTCCGCAGACGGCGCTGCCGGTTCCGCCGACCACATCGCCGCCGTCAACGGCCACAAATCTACCGTGACTGACCTCAACCTTGTCCCGATCGGCAACATCGGCAGCGGAGAGAACATCAAGCCGCTTCCCCCGAAGCCGCTGACGATCTCCGACCTCTCTCCTGCTCCGATGCACGGCTCTCAGCTCCGCGTCGCGTACCAGGGTGTCCCCGGCGCTTACTCCGAGGCCGCCGCCGGCAAGGCGTATCCAAACTCCGAGGCCATACCTTGCGACCAGTTCGAGGTTGCGTTCCAGGCGGTTGAGCTCTGGATCGCCGACCGCGCCGTCCTCCCGGTGGAAAACTCCCTCGGCGGCTCCATCCACCGCAACTACGACCTCCTCCTCCGCCACCGCCTCCACATCGTCGGCGAGGTCCAGCTCCCCGTCCACCACTGCCTCCTCGCACTCCCCGGAGTCCGCAAGGAGTACCTCACCCGTGTCATCTCTCACCCTCAGGCACTCGCCCAGTGCGAGCACACTCTCACGAAGCTCGGCCTCACCGTCGCTCGTGAGGCCGTCGATGACACCGCCGGCGCAGCCGAGTTCGTCGCCGTGAACCGCCTCCGCGACACAGCGGCGATTGCTAGTGCCCGCGCTGCCGAGCTCTACGGGCTTCAGGTTCTCGCGGATGGGATCCAGGACGACCCGAGTAACGTGACCCGGTTCGTTATGTTGGCCCGTGAGCCCATTATTCCCCGTACGGACAGGCCCTTTAAGACGAGCATTGTTTTTGCACACGATAAGGGGACTTCGGTTCTTTTTAAGGTGCTCTCGGCGTTTGCGTTTAGGAACATCAGTTTGACGAAGATCGAGTCGAGGCCTCATCGTAACCGTCCGATTAGGCTTGTTGATGATGCGAACGTGGGGACCGCGAAGCACTTCGAGTATTTGTTTTATGTGGATTTTGAGGCATCTATGGCAGAGGTTAGGGCACAGAACGCGTTGGCGGAGGTGCAGGAGTTCACGTCTTTCTTGCGGGTGTTGGGGAGTTACCCCATGGATATGACCCCTTGGAGTCCTTCTTCCCGGGGAAGTTAG 1290 0.6124 MQTVSQPTSNTLNHILRPRASPTRVAPTRISVKCAYGSEPASLGIGSNRADWQSSCAILSSNVVSQQKQSSSADGAAGSADHIAAVNGHKSTVTDLNLVPIGNIGSGENIKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNSEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALAQCEHTLTKLGLTVAREAVDDTAGAAEFVAVNRLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSSRGS* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1519 429 CDD ACT_CM-PDT 323 416 - -
Dod10g1519 429 Gene3D - 318 419 - -
Dod10g1519 429 ProSiteProfiles ACT domain profile. 325 416 IPR002912 -
Dod10g1519 429 ProSitePatterns Prephenate dehydratase signature 1. 287 309 IPR018528 GO:0004664|GO:0009094
Dod10g1519 429 ProSiteProfiles Prephenate dehydratase domain profile. 134 311 IPR001086 GO:0004664|GO:0009094
Dod10g1519 429 ProSitePatterns Prephenate dehydratase signature 2. 351 358 IPR018528 GO:0004664|GO:0009094
Dod10g1519 429 CDD PBP2_Ct-PDT_like 134 313 - -
Dod10g1519 429 Gene3D - 218 299 - -
Dod10g1519 429 PANTHER AROGENATE DEHYDRATASE 38 426 - -
Dod10g1519 429 MobiDBLite consensus disorder prediction 1 24 - -
Dod10g1519 429 SUPERFAMILY ACT-like 306 418 IPR045865 -
Dod10g1519 429 PIRSF Chor_mut_pdt_Ppr 119 420 IPR008242 GO:0004106|GO:0004664|GO:0009094
Dod10g1519 429 PIRSF Chor_mut_pdt_Ppr 50 107 IPR008242 GO:0004106|GO:0004664|GO:0009094
Dod10g1519 429 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 38 426 - -
Dod10g1519 429 Pfam Prephenate dehydratase 135 313 IPR001086 GO:0004664|GO:0009094
Dod10g1519 429 Gene3D - 129 217 - -
Dod10g1519 429 MobiDBLite consensus disorder prediction 1 17 - -
Dod10g1519 429 SUPERFAMILY Periplasmic binding protein-like II 134 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1519 Dod-Chr10 35852173 35854490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1519 K05359 - gmx:100797636 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1519 10 35852173 35854490 Dod10g1519 10 35852173 35854490 ECH
Dod10g1519 10 35852173 35854490 Dod03g2417 03 55489097 55491900 PCT