Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1498 ATGGCGGCGATAGTGAGTCACCACCACGTATTCTCCGCTGTCACGCGCTTCAGCGCCTCCTCCGCTACAACCACCGCGAGAAGAGGTTCGCGCGCAAACTCAGTTCGACGCTGTGCTGTGACCACGACGAGAGATAATCGCCTGGTCACGGTGAGTAGCAGGAACGAAAGATGCAGAGTCCTCAACGGAATGTGGCAGACGAGTAGAGGCTGGGGCCGAATCGACCGAGACGACGCCGTCGAGGCTATGCTCTGCTACGCCGACGCCGGCCTCTCCACCTTCGACATGGCTGATCACTCGATGACAGAGCCAGGGAGTGTCGAGGAGTTTTTCGAAGGAAAGACTGTTCTAATTACCGGTGCAACAGGATCCTTAGCGAAAATTTTTGTGGAGAAGATATTGAGGATTCAACCCAACATTAAAAAGTTATACCTTGTTGTAAGAGCATCAAATCCAAGTTTAGCTACACAACGCTTGCACAATGAGGTCTTTGGGAAGGATTTGTTCAGAATGCAACGAGATAAGTGGGGTGCAGACTTTGGTTCGTTTATATCCAAGAAAGTGGTTGCAGTTCCAGGTGATGTTTCTCTTGAAAAGTTTGGACTTAAAGACGCAAACCTGATTGAAGAGATGTCAGAAGAGATAAATATAGTAGTTCACTCTGCCGCAACAACTAGGTGGGATGAGAGATTCGATATCGCAATGGGTACAAATACGATGGAAGCTTATAATGCTTTGAACTTCGCTAAAAAATGTCGCAAAATAGAGATTTTTCTTCACGTATCTACTGCTTATGTGTGTGGGGACGCGGAAGGACTAATGACCGAAGAACCATTCCATATGGGTCAGACTCTAAAAAGGCCTTCAATATTAGACATCAACTCAGAAAAGCAGTTGATTGAAGAAAAACTGAGTGGACTCCGAGAGCAAAATGCCAGCAAAGGAACAATCGCTTCAACAATGAAAGAATTCGGAATGACAAGGGCAAATTTGCATGGATGGTCAAACACCTATGTTTTTACAAAAGCAATGGGAGAGATGCTTGTGGCAAATATGAACGATAATCTACCATTGATCATCACACGTCCTACTTGTATAATCAGTACTTACTCCAAACCCTTTCCAGGTTGTATTGAAGGTGTAAGGTATTTATTTATAAAGTCACCTTGTGCCGTTTATTTCAAGGGAACAATTGCTAGCTTTTCTGGTAATCTAAAGACAATTGTAGATCTGATACCTGCAGACATGGTGATAAACTCTATGATCATTGCACTGCTGTATCATTCTAAGAACCCTTCCAAGAATTTGATCTACCGTGCTGGCACTTCGTTAAGAAATCCATTTGAAGTTTCTGATTATCATGATCTGATGCATTGTTATGCTACAAACAATCCGTGGCTAAAAGTGTACGGAAATCCAGGGGATTTTTCTGAAAAATTAACTCTTGAGGATGAGTTGCGCCAAAACCAGGCATTGAGTTGTAAAACAAAGGTTAATTACTTAAGGGCATGTTTCTTTGACGATCAGAACGCAGAAAAATTGCGAATGGCAATGAAGAGAATTGCCAGCATGGACAAGGGATTTAACTTTGACCCCAAGGGTATTGATTGGAAGGACTACATGACGGATATCCACTTTCCAGGACTAGTGAAGTACAATATGGAGTATGCGAAATAG 1677 0.4329 MAAIVSHHHVFSAVTRFSASSATTTARRGSRANSVRRCAVTTTRDNRLVTVSSRNERCRVLNGMWQTSRGWGRIDRDDAVEAMLCYADAGLSTFDMADHSMTEPGSVEEFFEGKTVLITGATGSLAKIFVEKILRIQPNIKKLYLVVRASNPSLATQRLHNEVFGKDLFRMQRDKWGADFGSFISKKVVAVPGDVSLEKFGLKDANLIEEMSEEINIVVHSAATTRWDERFDIAMGTNTMEAYNALNFAKKCRKIEIFLHVSTAYVCGDAEGLMTEEPFHMGQTLKRPSILDINSEKQLIEEKLSGLREQNASKGTIASTMKEFGMTRANLHGWSNTYVFTKAMGEMLVANMNDNLPLIITRPTCIISTYSKPFPGCIEGVRYLFIKSPCAVYFKGTIASFSGNLKTIVDLIPADMVINSMIIALLYHSKNPSKNLIYRAGTSLRNPFEVSDYHDLMHCYATNNPWLKVYGNPGDFSEKLTLEDELRQNQALSCKTKVNYLRACFFDDQNAEKLRMAMKRIASMDKGFNFDPKGIDWKDYMTDIHFPGLVKYNMEYAK* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1498 558 PANTHER FATTY ACYL-COA REDUCTASE 107 555 - -
Dod10g1498 558 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 108 430 IPR036291 -
Dod10g1498 558 Pfam Male sterility protein 118 421 IPR013120 -
Dod10g1498 558 PANTHER MALE STERILITY PROTEIN 2-RELATED 107 555 IPR026055 GO:0080019
Dod10g1498 558 Gene3D - 86 501 - -
Dod10g1498 558 Coils Coil 290 310 - -
Dod10g1498 558 Pfam Male sterility protein 502 554 IPR033640 -
Dod10g1498 558 CDD FAR-N_SDR_e 114 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1498 Dod-Chr10 35517479 35560189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1498 109 473 Acyl Lipid Metabolism Gene Families AT5G22500 49.454 2.19e-121 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1498 K13356 - gmx:100793736 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1498 10 35517479 35560189 Dod03g2398 03 55150361 55154577 PCT