Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2398 ATGGACTCAAGAAGGTTACAATACTTTCTCAACGAGAGGACTATTTTAGTCACTGGTGCGACTGGCTTCTTGGCGAAAGTTTTTGTGGAGAAGGTACTTCGGATCCAACCAAACATAAGCAGACTGTATCTTCTTCTCAGAGCTTCAAACACCGAGCTGGCAACACAACGCTTGCAAAATGAGGGTGAAGAATTTGATTCTTTCATTTCAGAGAAGATTGTTGCCATAGCAGGTGATGTTTCACTCGAGAATTTAGGATTGAAAGATGCGAATCTTCAAAGGGAGATGTTCGAAAGAATTGACATCATTGTGAACTTCGCTGCATGTACCAAATTTGACGAAAGGGCAAAATTGTATGGATGGCCAAACACTTACGTGTTCACAAAGGCAATGGGGGAGATGCTTCTAGTGCATCTTAAAGATAACGTACCACTGATCATTATACGGCCTACCATGGTAACCAGTACTTACAATGACCCCTTCCCCGGGTGGATTGAAGGTTTGAGAACAGTTGACAGCATTGTTGCTGCCTACGGTAAAGGAAAGATAAATTGCTTTCTTGGTCATCCCAATACAATTTTAGACGCGGGTAAAGTCTGA 600 0.4233 MDSRRLQYFLNERTILVTGATGFLAKVFVEKVLRIQPNISRLYLLLRASNTELATQRLQNEGEEFDSFISEKIVAIAGDVSLENLGLKDANLQREMFERIDIIVNFAACTKFDERAKLYGWPNTYVFTKAMGEMLLVHLKDNVPLIIIRPTMVTSTYNDPFPGWIEGLRTVDSIVAAYGKGKINCFLGHPNTILDAGKV* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2398 199 Pfam Male sterility protein 17 116 IPR013120 -
Dod03g2398 199 Gene3D - 7 116 - -
Dod03g2398 199 Gene3D - 117 195 - -
Dod03g2398 199 PANTHER FATTY ACYL-COA REDUCTASE 8 115 - -
Dod03g2398 199 PANTHER FATTY ACYL-COA REDUCTASE 114 195 - -
Dod03g2398 199 PANTHER MALE STERILITY PROTEIN 2-RELATED 8 115 IPR026055 GO:0080019
Dod03g2398 199 PANTHER MALE STERILITY PROTEIN 2-RELATED 114 195 IPR026055 GO:0080019
Dod03g2398 199 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 182 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2398 Dod-Chr3 55150361 55154577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2398 115 195 Acyl Lipid Metabolism Gene Families AT3G44540 69.136 1.74e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2398 K13356 - psom:113351581 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1498 10 35517479 35560189 Dod03g2398 03 55150361 55154577 PCT