Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1406 ATGGATTACCGCATCTTCTGCTTCTTCTTCTTCTTCTTCTTCCACCTCCTCTTGTTCAGTCTCGCATTCTCGGATGACCCGAATCCGAGGCTGTCGGCGTCCTCATCAACAACGAGTCAGATCAACTCGAACTCAGTCCTGGTAGCACTCCTGGACTCGCATTACACCGAACTCGCCGAACTCATCGAAAAAGCCATGCTCCTCCAAACCTTGGAAGACGCCGTCGCCACCAACAACATCACCATCTTCGCACCCACAAACGAAGCCCTCGAACACCACCTCGACCCTCTCTTCAAGCGCTTCCTCCTCGAGCCCCGTAACCTCCACTCCCTCCAGACCCTCCTCCTCTCCCACATCGCCCCATCCCGGATCCGACCAGAATCACAATCCGGGTCGACCCGATTCAAAACCCTCTCCGATAACAACCACCACCTCATCCTCTCAACAAACTCCACCACAAAAGAACTGACCGTGGATCGGGTCATGATAACCCGACCGGAAGATATAACCCGACCCGACGGTGTGATCCACGGGATTGAACAGTTGCTTGTGCCGCGCTCCGTCCAGGACGACTTCAACCGCCGCCGCAGCCTCCGCTCAATCGCCGCCGTCAAACCCGAAGGCGCACCGGAGCACGATCCGAGGATCCACCGGGTCAAGAAACCCGACTCCAATGAAAAACATCCCGCCGGCTCCCCTCCGGAGCTCCCGATCTACGACGCATTGGCTCCGGCACCGTCGCTAGCTCCGGCACCGGCGCCGGGACCCGGAGGTCACCGCCACCACTTCGACGGCGAGTCTCAGGTGAAGGACTTCATCAAAACTCTCCTCCACTACGGCGGTTACAACGAGATGGCGGACATTCTTGTGAACCTGACGTCATTGGCAACCGAAATGGGTCGTTTGGTCTCGGAAGGTTACGTTCTGACGGTTCTTGCGCCCAATGACGAGGCGATGGCGAAGCTCACGACGGAGCAGCTGAGCGAACCTGGTGCGCCGGAGCAGATAATGTACTATCATCTGATACCGGAGTACCAGACGGAGGAGAGCATGTACAATGCTGTCAGAAGGTTCGGGAAGGTTCGGTATGATACCTTGCGGTTGCCGCATAAGGTGGTGGCGCAGGAGGCTGATGGGTCGGTTCGGTTCGGGAAAGGTGATGGGTCGGCTTATTTGTTCGACCCAGATATTTATACCGATGGGAGGATCTCTGTTCAGGGGATTGATGGGGTTTTGTTTCCTGATGAGGAGGAAGAGAAGGTGGAGCGGGTTAACCCGGTTAATCGGACGGGTCAACCCGGTAAGGTTGTTGTCAAGCATAGAAGAGGAAAATTGCTTGAAGGAGTGTGCTGGATGCTTGGAACTGTTGGACAGCATTCTAGATTCGCCTCTTGTCAATGA 1401 0.5596 MDYRIFCFFFFFFFHLLLFSLAFSDDPNPRLSASSSTTSQINSNSVLVALLDSHYTELAELIEKAMLLQTLEDAVATNNITIFAPTNEALEHHLDPLFKRFLLEPRNLHSLQTLLLSHIAPSRIRPESQSGSTRFKTLSDNNHHLILSTNSTTKELTVDRVMITRPEDITRPDGVIHGIEQLLVPRSVQDDFNRRRSLRSIAAVKPEGAPEHDPRIHRVKKPDSNEKHPAGSPPELPIYDALAPAPSLAPAPAPGPGGHRHHFDGESQVKDFIKTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVRFGKGDGSAYLFDPDIYTDGRISVQGIDGVLFPDEEEEKVERVNPVNRTGQPGKVVVKHRRGKLLEGVCWMLGTVGQHSRFASCQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1406 466 SUPERFAMILY FAS1 domain 44 186 IPR036378 -
Dod10g1406 466 ProSiteProfiles FAS1/BIgH3 domain profile. 269 397 IPR000782 -
Dod10g1406 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 466 - -
Dod10g1406 466 SMART fasc_3 310 415 IPR000782 -
Dod10g1406 466 SMART fasc_3 81 186 IPR000782 -
Dod10g1406 466 Pfam Fasciclin domain 294 414 IPR000782 -
Dod10g1406 466 Pfam Fasciclin domain 54 185 IPR000782 -
Dod10g1406 466 Gene3D FAS1 domain 46 186 IPR036378 -
Dod10g1406 466 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 1 466 IPR044654 -
Dod10g1406 466 SUPERFAMILY FAS1 domain 248 415 IPR036378 -
Dod10g1406 466 ProSiteProfiles FAS1/BIgH3 domain profile. 42 183 IPR000782 -
Dod10g1406 466 MobiDBLite consensus disorder prediction 203 264 - -
Dod10g1406 466 MobiDBLite consensus disorder prediction 203 228 - -
Dod10g1406 466 Gene3D FAS1 domain 264 415 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1406 Dod-Chr10 34359437 34364301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1406 - - adu:107477699 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1406 10 34359437 34364301 Dod03g2283 03 53224552 53229634 PCT