Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2283 ATGGATTCTTTCATCCATGGCACCACCTTCCTCACTTTCCTCCTCCTCCTACTCTCCAACACCCCCACCACATTCTCATCGCAAACCCCATCATCATCAACGGCTCAGATCAACTCAAACTCCATCCTCGTTGCTCTTCTGGACTCGCATTACACAGAGCTAGCGGAACTAGTTGAAAAAGCCATGCTCTTGCAGACACTAGAAGAAACAGTGGCGAACCACGACATCACAATCTTCGCCCCAAAGAACGAAGCGTTGGAACGCGATCTCGACCCCGAATTCAAGCGCTTCCTCCTCGAACCCCGAAACCTCAATTCCCTCCAGACCCTCATCATGTCCCACGTCGTCCCAACCCGAATCGGATCCCAACAAAAACCCGGGTCGACCCGACTCCAAACCCTCGCCGGCGACTACCACCACCTCCAAATCCACCCCAATTCCACCACTACCGCGGCCACAATCGACGGCGCCCGTGTCACCCACCCGGAAACCATAACCCGACCCGACGGCGTGATCCACGGAATCGAGCGCCTCCTGATCCCGCGCTCCGTCCAATCGGACTTCAGCAACCGCCGCAGCCTCAGCTCAATCGCCGCCGTGAAGCCCGAGGGAGCTCCAGAGGTCGACCCGAGAACCCACCGTCTGAAAAAACCAGCTCCGCCGTCGAATCCAGGCTCCCCTCCGGCGCTCCCGATTTACGACGCGTTGGCGCCAGGACCATCCATAGCTCCGGCGCCGGCACCGGGACCCGGAGGCCGGCACCACCACTTCAACGGCGAAGCCCAAGTAAAGGATTTCATCCACACGCTCCTCCATTACGGCGGTTACAACGAGATGGCCGACATTCTCGTCAACCTAACGTCGTTAGCGACTGAAATGGGGCGTTTGGTCTCTGAGGGCTACGTCCTGACGGTTTTGGCGCCGAACGACGAGGCAATGGGGAAGCTAACGACGGAGCAGTTGAGTGAGCCGGGTGCACCGGAGCAGATAATGTACTACCACCTGATCCCGGAGTACCAAACGGAGGAGTCGATGTACAATGCGGTTAGAAGGTTCGGGAAGGTTCGGTACGACACGCTTCGGGTTCCGCATAAGGTGGTGGCGCAGGAGGCTGACGGGTCGGTTAGGTTCGGGCATGGGGATGGGTCGGCTTATTTGTTTGACCCCGACATCTATACGGATGGGAGGATTTCGGTTCAGGGGATTGATGGGGTCTTGTTTCCGCCGGAGGAGGAGGAGGAGGAGGAGAAGAAGGAGAAGAAGGAGGGTCCGGGCCGGGTTGGGAGAACGGGTCAGACCGGGAAGGTCGTGGTCCAGCAGAGGAGAGGTGCGCTTTCTTTTCATTCACTTTTACTTTTGCTTCATTTTTTATTTATCTTCACACTAATTATTTCAAGGATTTAA 1404 0.5684 MDSFIHGTTFLTFLLLLLSNTPTTFSSQTPSSSTAQINSNSILVALLDSHYTELAELVEKAMLLQTLEETVANHDITIFAPKNEALERDLDPEFKRFLLEPRNLNSLQTLIMSHVVPTRIGSQQKPGSTRLQTLAGDYHHLQIHPNSTTTAATIDGARVTHPETITRPDGVIHGIERLLIPRSVQSDFSNRRSLSSIAAVKPEGAPEVDPRTHRLKKPAPPSNPGSPPALPIYDALAPGPSIAPAPAPGPGGRHHHFNGEAQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTEQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRVPHKVVAQEADGSVRFGHGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEEEEEKKEKKEGPGRVGRTGQTGKVVVQQRRGALSFHSLLLLLHFLFIFTLIISRI* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2283 467 SUPERFAMILY FAS1 domain 36 182 IPR036378 -
Dod03g2283 467 SUPERFAMILY FAS1 domain 242 410 IPR036378 -
Dod03g2283 467 ProSiteProfiles FAS1/BIgH3 domain profile. 38 179 IPR000782 -
Dod03g2283 467 MobiDBLite consensus disorder prediction 411 426 - -
Dod03g2283 467 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 2 446 IPR044654 -
Dod03g2283 467 Gene3D FAS1 domain 42 182 IPR036378 -
Dod03g2283 467 Pfam Fasciclin domain 50 181 IPR000782 -
Dod03g2283 467 Pfam Fasciclin domain 288 408 IPR000782 -
Dod03g2283 467 MobiDBLite consensus disorder prediction 220 234 - -
Dod03g2283 467 Gene3D FAS1 domain 282 409 IPR036378 -
Dod03g2283 467 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 2 446 - -
Dod03g2283 467 SMART fasc_3 77 182 IPR000782 -
Dod03g2283 467 SMART fasc_3 304 409 IPR000782 -
Dod03g2283 467 MobiDBLite consensus disorder prediction 410 433 - -
Dod03g2283 467 ProSiteProfiles FAS1/BIgH3 domain profile. 263 391 IPR000782 -
Dod03g2283 467 MobiDBLite consensus disorder prediction 195 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2283 Dod-Chr3 53224552 53229634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2283 - - adu:107477699 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1406 10 34359437 34364301 Dod03g2283 03 53224552 53229634 PCT