Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1379 ATGTATATTCAATCGGCATCCTCGTCTTGCGCGCTCCTAAGAGCAACCAGGTCCAAGCTCTCTTCCTCTCTTTCTAGAACCTTCCTCTCTTCTCCCGCCCCCCGCCCTACCGTTCACTACCGATCCCTCGCCACCTCCTCCTCCGCCGCCCTCCGCCACTCCTCTTCCCCTTTCCTCAGCTGGAGCCACTGGAGGTCTCCCCTCACCCTCCGCTCTCAGATCAGAGCCGCCTCCCCCGTCCTCGATCGCCACCACCGCAAGATCGCCACTATGGCTAGTGAAAATCCTTTCAAGGGAAACCTGACCAGCCTCCTCAAGCCTGGTGGCGGCGAGTTTGGGAAGTTCTACAGCCTTCCTTCTCTCAACGACCCAAGAATTGATAGGTTACCATATTCTATCAGAATTCTACTTGAATCCTCCATCCGTAATTGCGACAATTTCCAAGTTACTAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAACAGTTCTGTGAAGCAAGTTGAAATCCCTTTCAAGCCTGCTCGTGTTCTCCTGCAGGATTTTACTGGAGTCCCAGCTGTTGTTGACCTGGCTTGCATGCGTGATGCTATGAATAAGCTTGGCAGTGATTCTAACAAGATCAATCCTCTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTTGATGTTGCAAGGTCAGAGAATGCAGTGCAAGCCAACATGGAGCTTGAGTTTAAGAGAAACAAGGAGAGGTTTGCTTTTCTTAAATGGGGGTCAACTGCTTTCCATAATATGCTTGTTGTTCCTCCTGGCTCTGGTATTGTACATCAGGCAGTACTCTATCCTGACAGTGTGGTTGGTACCGATTCACATACAACAATGATAGATGGTCTTGGAGTTGCTGGATGGGGTGTTGGGGGTATTGAAGCAGAGGCGGCAATGCTTGGCCAGCCTATGAGCATGGTGTTACCTGGCGTTGTTGGGTTTAAGTTATCTGGAAAATTGCGCAATGGTGTTACCGCAACTGATTTGGTTCTAACTGTGACACAAATGCTTAGGAAACATGGTGTTGTTGGGAAATTTGTTGAATTTTATGGTGATGGTATGGGTGAATTATCATTAGCTGACCGGGCCACTATTGCCAATATGTCTCCTGAATATGGGAGCAACCATGGGCTTCTTCCCCGTCGATCATGTTACATTACAATACCTCAAGTGGCAATGATAGAGGCTTATCTCAGGGCAAACAAAATGTTTGTTGACTATAAGGAGCCCCAACAAGAGAGAGTTTATTCATCCTATCTTGAATTGAACCTTGATGATGTTGAACCATGTATCTCTGGGCCAAAGAGACCTCATGATCGGGTGCCTTTGAAGGAAATGAAGTCTGACTGGCATGCTTGTCTTGATAACAAAGTGGGGTTTAAGGGATTTGCTATACCAAAAGAAGCACAAGGCAAAATTGCAAAATTTGATTTCCATGGGCAGCCAGCGGAGCTCAAACATGGCAGTGTTGTGATTGCTGCAATTACAAGCTGTACAAATACATCAAACCCGAGTGTTATGCTAGGGGCTGGTCTTGTTGCCAAAAAGGCCCATGAGCTTGGTTTGCAGGTCAAGCCTTGGGTAAAAACAAGTCTTGCTCCAGGCTCTGGAGTAGTTACAAAATATCTACATCAGAGTGGCCTGCAAAAGTATCTAAATGAACAGGGTTTCAATATTGTTGGATTTGGCTGTACAACATGCATTGGCAATTCTGGGGATCTGGATGAATCAGTTGCTTCTGCTATCTCAGAAAATGACATTTTAGCGGCTGCTGTGTTGTCTGGGAACCGTAATTTTGAGGGCCGTGTGCATCCCTTGACAAGAGCTAACTACCTTGCCTCACCACCTCTAGTTGTTGCATATGCTCTTGCTGGCACGGTTGACATTGACTTTGAAACGGAGCCAATAGGAACAGGGAAGAACGGCAAGAATATCTACTTGAGGGATATTTGGCCATCCACTGAAGAAATTGCACAGGCTGTCCAATCCAGTGTGTTGCCTGACATGTTCCGAAGTACATATGAATCTATTACCAAGGGTAACCCCATGTGGAACCACCTACAAGTTCCTGCTGACAAGTTGTACTCATGGGACCCCAACTCAACATATATCCATGAACCTCCATACTTCAAGGGCATGACCATGGATCCTCCTGGAGCACATGGTGTGAAAGATGCCTATTGCCTACTGAACTTTGGCGACAGTATAACTACTGATCACATTTCTCCTGCTGGAAGCATTCACAAGGACAGTCCTGCTGCAAAGTACCTTATGGAGCGTGGAGTGGACCGAAAGGACTTCAATTCTTATGGAAGTCGTCGTGGCAATGATGAGATCATGGCAAGGGGTACTTTTGCCAACATCCGCCTTGTTAACAAGCTCTTAAATGGGGAAGTTGGCCCAAAGACAGTTCACATTCCTACAGGGGAGAAGCTTTATGTGTTTGATGCAGCAATGAGATACAAGGCTGAAGGGCATGACACCATTGTGCTGGCTGGAGCTGAATATGGTAGTGGAAGTTCAAGAGATTGGGCTGCCAAGGGTCCCATGCTATTGGGAGTCAAAGCCGTGATAGCTAAAAGTTTTGAGAGAATTCATCGCAGTAACTTGGTAGGAATGGGTATTATTCCTCTTTGCTTCAAAGCTGGCGAGGATGCGGACACTTTGGGATTGACTGGTCAAGAACGATACAGCATTGACCTCCCAAGTAAAATTAGTGAGATCAGGCCTGGCCAAGATGTCACTGTCACAACTAATACCGGAAAGGCTTTCACATGCACAGTTCGCTTTGATACTGAGGTGGAACTAGCCTACTTCAACCATGGAGGTATACTCCCATATGTCATCAGGAACCTCATCACACAGTGA 2901 0.4654 MYIQSASSSCALLRATRSKLSSSLSRTFLSSPAPRPTVHYRSLATSSSAALRHSSSPFLSWSHWRSPLTLRSQIRAASPVLDRHHRKIATMASENPFKGNLTSLLKPGGGEFGKFYSLPSLNDPRIDRLPYSIRILLESSIRNCDNFQVTKEDVEKIIDWENSSVKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFKRNKERFAFLKWGSTAFHNMLVVPPGSGIVHQAVLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLRNGVTATDLVLTVTQMLRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGSNHGLLPRRSCYITIPQVAMIEAYLRANKMFVDYKEPQQERVYSSYLELNLDDVEPCISGPKRPHDRVPLKEMKSDWHACLDNKVGFKGFAIPKEAQGKIAKFDFHGQPAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAHELGLQVKPWVKTSLAPGSGVVTKYLHQSGLQKYLNEQGFNIVGFGCTTCIGNSGDLDESVASAISENDILAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFETEPIGTGKNGKNIYLRDIWPSTEEIAQAVQSSVLPDMFRSTYESITKGNPMWNHLQVPADKLYSWDPNSTYIHEPPYFKGMTMDPPGAHGVKDAYCLLNFGDSITTDHISPAGSIHKDSPAAKYLMERGVDRKDFNSYGSRRGNDEIMARGTFANIRLVNKLLNGEVGPKTVHIPTGEKLYVFDAAMRYKAEGHDTIVLAGAEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKAGEDADTLGLTGQERYSIDLPSKISEIRPGQDVTVTTNTGKAFTCTVRFDTEVELAYFNHGGILPYVIRNLITQ* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1379 966 Gene3D Aconitase, domain 3 441 664 IPR015931 -
Dod10g1379 966 PANTHER ACONITATE HYDRATASE 58 966 - -
Dod10g1379 966 CDD AcnA_IRP 176 638 - -
Dod10g1379 966 Gene3D Aconitase, domain 4 729 965 IPR015928 -
Dod10g1379 966 ProSitePatterns Aconitase family signature 1. 501 517 IPR018136 -
Dod10g1379 966 TIGRFAM aconitase_1: aconitate hydratase 1 113 964 IPR006249 -
Dod10g1379 966 CDD AcnA_IRP_Swivel 742 912 IPR044137 -
Dod10g1379 966 PRINTS Aconitase family signature 237 250 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 505 516 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 261 269 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 366 379 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 567 580 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 276 289 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 352 365 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 440 454 IPR001030 -
Dod10g1379 966 PRINTS Aconitase family signature 290 305 IPR001030 -
Dod10g1379 966 Pfam Aconitase C-terminal domain 765 893 IPR000573 -
Dod10g1379 966 Gene3D Aconitase, domain 3 94 440 IPR015931 -
Dod10g1379 966 Gene3D - 665 726 - -
Dod10g1379 966 SUPERFAMILY LeuD/IlvD-like 705 963 - -
Dod10g1379 966 SUPERFAMILY Aconitase iron-sulfur domain 110 701 IPR036008 -
Dod10g1379 966 ProSitePatterns Aconitase family signature 2. 567 580 IPR018136 -
Dod10g1379 966 Pfam Aconitase family (aconitate hydratase) 155 636 IPR001030 -
Dod10g1379 966 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 58 966 IPR006249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1379 Dod-Chr10 33992911 34000703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1379 K01681 - gmx:100810088 1660.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1379 10 33992911 34000703 Dod10g1379 10 33992911 34000703 ECH
Dod10g1379 10 33992911 34000703 Dod03g2251 03 52769476 52770750 PCT
Dod03g2252 03 52770758 52783232 Dod10g1379 10 33992911 34000703 PCT