Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2252 ATGTATAAAACCACCTCTTCGCTTCTCAGAGCAACCAGGTCCAAGGTATCTTCCTCTTCTTCTAGAACCTTCGCTTACACTCACACCCGCACCTCTCCTCCTCTAACCACCGCGTCTTCGTCACGGGCCTTCTCTTCCGCCGCCGCAGCGCGTTCCTTCCCGCGTTGGAGCCACCGCCTCGACTGGAGCTCTCCGCTCAGCCTCCGCGCTCAGATCAGAGCCGTCGCTCCCCTCCTCGAACGCTTCCACCGCAACTTCGCCTCCATGGCTAGCGAAAATCCTTTCAAGGGAAACCTGACTAGTCTCCCCAAGCCCAGTGGCGGTGAGTTTGGAAAGTTCTACAGTCTTCCTTCTCTCAATGATCCAAGAGTTGACCGGTTGCCATACTCTATCAGAATTCTCCTTGAATCTGCTATTCGTAACTGTGACAATTTCCAAGTCACGAAAGAAGATGTTGAGAAGATTATTGACTGGGAAAACTCGTCTTCGAAGCAAGTTGAGATTCCTTTCAAGCCTGCTCGTGTCCTTTTGCAGGATTTCACCGGAGTCCCAGCTGTTGTTGACCTGGCTTGCATGCGTGATGCTATGAATAAACTTGGAAGTGATTCTAATAAGATTAATCCTCTGGTTCCTGTTGATCTTGTCATTGATCATTCAGTTCAAGTTGATGTAGCAAGGTCAGAAAATGCAGTGCAGGCAAATATGGAGCTTGAATTCCAGAGAAACAAGGAGAGATTTGCTTTTCTCAAATGGGGGTCAACTGCATTCCGTAACATGCTCGTTGTTCCTCCAGGTTCTGGTATAGTTCATCAGGTCAATCTTGAATATCTTGGACGGGTTGTTTTCAACAATGAGGGCTTATTATATCCTGACAGTGTGGTTGGGACTGATTCACATACAACTATGATAGATGGGCTTGGTGTTGCTGGATGGGGTGTTGGAGGTATTGAAGCTGAGGCAGCAATGCTTGGCCAGCCTATGAGCATGGTGTTGCCTGGTGTTGTTGGGTTCAAGTTATCTGGAAAATTGCACAATGGTGTTACAGCAACCGACTTAGTTCTAACCGTGACACAAATTCTTAGAAAGCATGGAGTTGTTGGGAAATTTGTTGAATTTTATGGTGATGGTATGGGTGAATTATCATTAGCTGACAGGGCCACTATTGCTAACATGTCTCCTGAATATGGTGCTACCATGGGCTTCTTCCCTGTTGATCATGTTACATTACAGTATCTCAAGTTAACTGGAAGACGTGATGAGACTGTGGCTATGATAGAGTCTTATCTCAGGGCAAACAAAATGTTCGTTGACTATAATGAGCCACAAAAGGACAGAGTTTATTCTTCATATCTTGAATTAAACCTTTCTGATGTTGAACCATGTATCTCCGGACCGAAGAGACCTCATGATCGGGTGCCTTTGAAAGAAATGAAGGCTGACTGGCATTCCTGTCTTGATAACAAAGTTGGGTTTAAGGGATTTGCTATACCACAAGAGGCACAAGGAAAAGTTGCAAAATTTAATTTCCATGGGCAGCTAGCGGAGCTCAAGCATGGCAGTGTTGTGATTGCTGCAATCACAAGCTGTACAAATACATCAAACCCGAGTGTTATGCTTGGGGCCGGTCTTGTTGCGAAAAAGGCTTATGAGCTTGGTTTGAAGGTCAAACCTTGGGTTAAAACAAGTCTTGCTCCAGGCTCAGGAGTTGTTACAAAATATCTACTCCAGAGTGGACTGCAGAAAAATCTGAATGAACAAGGTTTTAATATTGTTGGATTTGGCTGTACAACATGTATTGGCAATTCTGGGGATCTGGATGAATCTGTTGCTTCTGCCATCTCAGAAAATGACATTGTGGCGGCTGCAGTGTTGTCTGGGAACCGTAATTTTGAGGGCCGTGTGCATCCCTTGACTAGGGCTAACTACCTTGCCTCACCTCCTCTAGTTGTTGCTTATGCTCTTGCTGGCACGGTTGACATTGACTTTGAGAAGGAGCCAATTGGGAAAGCGAAGGATGGCAAGGATGTGTACTTGAGGGATATCTGGCCATCTACTGAAGAAATTGCAGAGGTTGTGCAATCTAGTGTGTTGCCGGACATGTTCCGAAGTACGTATGAGGCTATTACCAAGGGTAACCCTATGTGGAATCAACTACAAGTTCCTGCTGACAAACTTTACTCATGGGACCCCAACTCAAGTTATATTCACGAACCCCCATACTTCAAGAACATGACCATGGATCCTCCTGGAGCTCATGGCATCAAAGATGCCTATTGCCTGTTGAATTTTGGTGACAGTATAACCACTGATCACATTTCTCCTGCTGGAAGCATTAACAAGGACAGTCCTGCTGCTAAATACCTTCTGGAGCGTCGGGGTGGAACGCAAGGACTTCAATTCTTATGGAAGTCGGCGTGGCAATGA 2424 0.4583 MYKTTSSLLRATRSKVSSSSSRTFAYTHTRTSPPLTTASSSRAFSSAAAARSFPRWSHRLDWSSPLSLRAQIRAVAPLLERFHRNFASMASENPFKGNLTSLPKPSGGEFGKFYSLPSLNDPRVDRLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWENSSSKQVEIPFKPARVLLQDFTGVPAVVDLACMRDAMNKLGSDSNKINPLVPVDLVIDHSVQVDVARSENAVQANMELEFQRNKERFAFLKWGSTAFRNMLVVPPGSGIVHQVNLEYLGRVVFNNEGLLYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLHNGVTATDLVLTVTQILRKHGVVGKFVEFYGDGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQYLKLTGRRDETVAMIESYLRANKMFVDYNEPQKDRVYSSYLELNLSDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGFKGFAIPQEAQGKVAKFNFHGQLAELKHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAYELGLKVKPWVKTSLAPGSGVVTKYLLQSGLQKNLNEQGFNIVGFGCTTCIGNSGDLDESVASAISENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGKAKDGKDVYLRDIWPSTEEIAEVVQSSVLPDMFRSTYEAITKGNPMWNQLQVPADKLYSWDPNSSYIHEPPYFKNMTMDPPGAHGIKDAYCLLNFGDSITTDHISPAGSINKDSPAAKYLLERRGGTQGLQFLWKSAWQ* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2252 807 SUPERFAMILY LeuD/IlvD-like 725 792 - -
Dod03g2252 807 Gene3D Aconitase, domain 3 92 460 IPR015931 -
Dod03g2252 807 PANTHER ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER 54 791 IPR006249 -
Dod03g2252 807 Gene3D Aconitase, domain 4 749 799 IPR015928 -
Dod03g2252 807 Gene3D Aconitase, domain 3 461 684 IPR015931 -
Dod03g2252 807 TIGRFAM aconitase_1: aconitate hydratase 1 111 791 IPR006249 -
Dod03g2252 807 SUPERFAMILY Aconitase iron-sulfur domain 106 721 IPR036008 -
Dod03g2252 807 Pfam Aconitase family (aconitate hydratase) 153 656 IPR001030 -
Dod03g2252 807 ProSitePatterns Aconitase family signature 2. 587 600 IPR018136 -
Dod03g2252 807 PRINTS Aconitase family signature 235 248 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 302 317 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 460 474 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 378 391 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 259 267 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 364 377 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 288 301 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 525 536 IPR001030 -
Dod03g2252 807 PRINTS Aconitase family signature 587 600 IPR001030 -
Dod03g2252 807 ProSitePatterns Aconitase family signature 1. 521 537 IPR018136 -
Dod03g2252 807 Gene3D - 685 746 - -
Dod03g2252 807 CDD AcnA_IRP 174 658 - -
Dod03g2252 807 PANTHER ACONITATE HYDRATASE 54 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2252 Dod-Chr3 52770758 52783232 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2252 K01681 - gmx:100810088 1401.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2252 03 52770758 52783232 Dod03g2252 03 52770758 52783232 ECH
Dod03g2252 03 52770758 52783232 Dod10g1379 10 33992911 34000703 PCT