Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1336 ATGTCTAAGATGATGTCTGGGGTCTTGGGGCTCTTAGTGGGTCTAGTTTTGGTGGGGTCTGTTGCCTCTTCCAAGTTTGAGGAACTCTTCCAGCCCGGTTGGGCTTCTGATCATTTCGTCCAAGAAGGAGAACTCCTCAAACTCAAACTAGATAACTATTCTGGTGCTGGATTTGGATCCAAAAGCAAATATATGTTTGGGAAGGTGACCATCCAGCTTAAGCTTGTGGAGGGTGATTCTGCTGGAACCGTTACTGCTTTCTATATGTCATCGGACGGTCCAAATCACAACGAATTTGATTTCGAGTTTTTGGGCAACACCACTGGAGAGCCTTACTCGGCCCAGACCAACGTTTATGTGAATGGCGTCGGTAACAGGGAGCAGAGGCTCAACCTGTGGTTCGACCCCGCCAAGGAGTTCCACAATTACTCTATCTTCTGGAATCAGCGCCAAGTTGTGTTCCTAGTGGATGATACACCAATAAGGGTACACACAAACCTTGAACACAAGGGAATCCCATTCCCTAAAGACCAAGCCATGGGTGTGTACAGCTCAATATGGAACGCTGACGATTGGGCCACACAAGGTGGTCGTGTGAAGACAGATTGGAGCCATGCCCCGTTCCTTGCCACATACAAGGACTTCGAAATCAATGCATGCGAGTGCCCAACGCCAGTGGCATCAGCGGATAACGCCAAGAGGTGCAGCAGCAGTGAGGATAAGAAGTATTGGTGGGACGAGCCCACATTGTCCGAGCTCAATTTGCACCAGAGCCACCAGCTTATGTGGGTTAGAGCCAACCATATGGTCTACGACTACTGCACTGACACTGCAAGGTTCCCGGTTACACCTGCTGAGTGTGTCCACCACCGTCACTAG 879 0.4994 MSKMMSGVLGLLVGLVLVGSVASSKFEELFQPGWASDHFVQEGELLKLKLDNYSGAGFGSKSKYMFGKVTIQLKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYSAQTNVYVNGVGNREQRLNLWFDPAKEFHNYSIFWNQRQVVFLVDDTPIRVHTNLEHKGIPFPKDQAMGVYSSIWNADDWATQGGRVKTDWSHAPFLATYKDFEINACECPTPVASADNAKRCSSSEDKKYWWDEPTLSELNLHQSHQLMWVRANHMVYDYCTDTARFPVTPAECVHHRH* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1336 292 CDD GH16_XET 22 287 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod10g1336 292 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 291 IPR013320 -
Dod10g1336 292 PIRSF EndGlu_transf 1 292 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod10g1336 292 Pfam Glycosyl hydrolases family 16 30 204 IPR000757 GO:0004553|GO:0005975
Dod10g1336 292 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 240 287 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Dod10g1336 292 Gene3D - 14 292 - -
Dod10g1336 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 11 290 - -
Dod10g1336 292 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 11 290 IPR044791 GO:0004553
Dod10g1336 292 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 24 212 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1336 Dod-Chr10 33505217 33507784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1336 56 292 Glycoside Hydrolase AT4G03210 77.215 3.81e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1336 K08235 - gmx:100801567 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1336 10 33505217 33507784 Dod10g1336 10 33505217 33507784 ECH
Dod03g2215 03 52120510 52123205 Dod10g1336 10 33505217 33507784 PCT