Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1101 ATGCCACTGGCTTTGTCCTCGGATTCCAGCGATCTCCGGTCGCCGCTGGTGGCGGCGCCATCGAAAGAGGCGGAGGAGACGGAGAAGCTGTGCATCGACGATATGCTTCAGAAGTACTGCGGCGAGTTCGGGCGGTGGCAGCTGAGGCACTTCGTCCTCACCAGCCTCGCGTGGGCACTTGAGGGCTTCCACACCATGGTCATGATTTTCGCCGACAGACAGCCCGAGTGGCGGTGCCTGGGCGGTACCGCCGAATGCGACGGCGGAGGAGGGAGCTTGTGCGGGCTGCAGCCGGGTGAGTGGGAGTGGGTTGGGGGACGCGGCGGCGCCACCGTATCGGAGTGGGGGCTGATCTGCGGTGACAAGTTTAAGGTTGGGCTTGTCCAGGCCTTGTTCTTTGGCGGCTGTATGATCGGTGCTGGTATATTTGGTCACCTCTCAGACTCCTTTCTTGGAAGGAAAGGCTCACTCACGGTGGTTTGCGCCTTAAACGCCGTGTTTGGCTGCCTTACAGCACTCTCTCCAAACTATTGGATCTATGTCCTCCTCCGCCTCCTCACCGGCTTCAGCACCGGTGGCGTTGGCCTCTGCGCCTTCGTCCTTGCCACCGAGCCCATTGGCCCCAGCAAGCGCGGGGTCGCCGGCATGTCCACCTTCTACTTCTTCTCCACAGGCATTGCACTCCTCTCCGCCATCGCCTACATCTTCCAAACATGGCGCTACCTCTACATCGCCTCCTCAGTCCCCTCCATCCTCTTCGTACTCCTCGTCCTCCCATTCCTCTCGGAGTCTCCGAGGTGGTACCTCGTCCGTGGGAGAGTGTCCGATGCCATGAAGCTCATGTCCACCATTGCTTCCACCAATGGGAAACACCTCCCAAGTGGTGTTCTCCTCTCACTGGACGAAGAAGCAGAATCAGAAGCAGAATCAGAAACAGCAGTTATTAATGGCTCACGCCACAACCTAACCTTCAAGAATGAACTCCTGGAGAACAAAGACGCGCTCATTGGGTCCATAGTCGACGTGCTTCGCTCACCAATCACGCGTGTAAGGTTGTTTCTAGCGGTGGCCATTAACCTCATGGCCTCCGTGGTGTACTATGGTTTGAGTCTAAACGTGGTGAACCTCGATACCAACCTTTACATAAACGTGGCATTGAATGCGGTGGCGGAGATGCCGGCGTTTGGGATAACAGCGGTGTTGTTGGGCAAGTTTGGGAGGAAGCCTTTGACGATAGGGACAATGTGGTTCAGCGGGTTCTTTTGTTTATTAGGTAGTATGATGAGGAGTGTTGGGGTGTGGAAGTTCGTGAGAATGGCGTGTGGTATTTTGGGTATATTTGGGATGGCGGGGACTTATAATTTGCTGTTTATTTACACGGCAGAGCTGTTCCCCACGGTGGTGAGGAACGCTGCGCTAGGGTGCGCTACACAAGCGGCACAGATGGGGGCAATATTGTCACCGGTGATTGTTGTTTTGGGAGGATGGTTGCCGTTTGCAGTGTTTGCGGCTTGTGGCATAGCGGGTGGAGTGTTTGCATTTTATTTGCCGGAGACTTTGAATCAGCCTTTGTATGATACTTTTACTGGATTGGAGGCTGGGCTTGTGTGA 1611 0.5549 MPLALSSDSSDLRSPLVAAPSKEAEETEKLCIDDMLQKYCGEFGRWQLRHFVLTSLAWALEGFHTMVMIFADRQPEWRCLGGTAECDGGGGSLCGLQPGEWEWVGGRGGATVSEWGLICGDKFKVGLVQALFFGGCMIGAGIFGHLSDSFLGRKGSLTVVCALNAVFGCLTALSPNYWIYVLLRLLTGFSTGGVGLCAFVLATEPIGPSKRGVAGMSTFYFFSTGIALLSAIAYIFQTWRYLYIASSVPSILFVLLVLPFLSESPRWYLVRGRVSDAMKLMSTIASTNGKHLPSGVLLSLDEEAESEAESETAVINGSRHNLTFKNELLENKDALIGSIVDVLRSPITRVRLFLAVAINLMASVVYYGLSLNVVNLDTNLYINVALNAVAEMPAFGITAVLLGKFGRKPLTIGTMWFSGFFCLLGSMMRSVGVWKFVRMACGILGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILSPVIVVLGGWLPFAVFAACGIAGGVFAFYLPETLNQPLYDTFTGLEAGLV* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1101 536 SUPERFAMILY MFS general substrate transporter 44 524 IPR036259 -
Dod10g1101 536 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod10g1101 536 MobiDBLite consensus disorder prediction 1 20 - -
Dod10g1101 536 Gene3D MFS general substrate transporter like domains 47 528 IPR036259 -
Dod10g1101 536 Pfam Sugar (and other) transporter 122 525 IPR005828 GO:0016021|GO:0022857|GO:0055085
Dod10g1101 536 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 32 533 - -
Dod10g1101 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 521 IPR020846 GO:0022857
Dod10g1101 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 32 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1101 Dod-Chr10 29992230 29997166 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1101 6 532 Organic Solute Cotransporters AT3G20660 67.486 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1101 K08202 - gmx:100797665 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1101 10 29992230 29997166 Dod03g1941 03 43188707 43192235 PCT