Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1941 ATGCCAATAACATCGTCACCACATGACACTAATGCCCTACCAAAGCCGAAACTCCAATCGCCGCTCATGCATCCAGAGGCAAAGAATGCAGGCATAGGTCCTATACAGGAGAAATTGTGCATTGACGAGATGCTCCAAAGATACTGCGGTGAGTTTGGGAGGTGGCAGTTGAGGCACTTCGTGCTCACGAGCCTTGCATGGGCCCTTGAGGCGTTCCATACCATGGTCATGATATTCGCAGACCGCGAACCACAATGGAGATGTATCGCTAAAGGCTGTGACCCAACCGCACGAACCGTGTGCCAGTTTGAACCGGGTTCATGGGAGTGGGTGGGAGGAAAAGATGTGTCAATTGTTGCGGAGTGGGTGCTGGTTTGTGGTGATAAGTATAAGGTTGGACTCGTTCAGGCCTCATTCTTTGGCGGCTGCATGATTGGTGCTGGAATATTTGGTCACCTCTCAGATTCATCTCTCGGAAGAAAAGGCTCTCTCACTGTGGTTTGCATCTTGAACACCATCTTTGGCACCTTAACATCACTCTCCCAAAACTATTGGTCCTATGTTGCCTTGCGTATCCTCACTGGCTTCAGCACTGGTGGTGTGGGCCTTTGTGCCTTCGTCCTCGCCACAGAGCCAGTGGGGCCCACGATGCGTGGCATCGCTGGCATGTCCACCTTTTACTTCTTCTCTTCTGGCATTGCACTCCTATCCGCCATAGCATATGTCTTCCCAGCATGGCGCAACCTCTACATCGCCTCCTCCATGCCCTCCCTCGCCTTCCTCCTCTTCATCCTCCCCTTCATTACTGAATCCCCAAGGTGGTACCTCGTGAGAGGAAGAATCAAAGAAGCCATGAAGATTATGTCTACAATCGCAACCTCCAATGGCAAACACCTTCCAAAAGAGGTTCTTCTCACCCTCGACGAAGAATCATCATCATCAGCATCATCACCACCCATTTTATTATCACCATTTTCATCAACAGCATTGCTATCGAAGGAACCCTTAGAGAATAAAGCTGCAATAATGGGTTCGCTAGTAGATGTTATTCGCTCCCCAATAACCCGCTTACGTTTGTTCCTAATGGTAGTTATAAACTTCTTGTGTTCTGTGGTGTACTATGGGCTTAGTCTTAATGTAGTGAACCTGGAAACAAACCTTTACCTCAATGTGATCCTCAATGCTGTGGCGGAGATGCCAGCATTCATGATAACAGCATTGTTATTGGACAAGTTAGGGAGGAAACCCTTGACCATAGGAACCATGTGGTTTAGTGGCTTCTTTTGCTTCATAGGGAGCCTAATGGGCAACATTGGGGTTTGGAAAGGTGTGAGAATGGTGTGTGGAATAATGGGTATCTTTGGGATGGCAGGGACTTACAACTTGCTATTTATTTACACAGCAGAGCTGTTCCCCACGGTGGTGAGGAATGCCGCACTCGGGTGCGCCACCCAAGCAGTGCAGATGGGCGCCATCTTAGCACCGATAGTTGTGGTGTTAGGAGGGTGGTGGCCCTTTGTCGTGTTTGCATTTTGTGGGATGATTGGTGGGCTCTTCGCATTTCATTTGCCTGAGACTCTGAACCAACCGCTCTATGATACATTAGCAGGAATGGAGGCTGTGGAAAATGAAACAGATGCCAAAACAACTATATGA 1656 0.4873 MPITSSPHDTNALPKPKLQSPLMHPEAKNAGIGPIQEKLCIDEMLQRYCGEFGRWQLRHFVLTSLAWALEAFHTMVMIFADREPQWRCIAKGCDPTARTVCQFEPGSWEWVGGKDVSIVAEWVLVCGDKYKVGLVQASFFGGCMIGAGIFGHLSDSSLGRKGSLTVVCILNTIFGTLTSLSQNYWSYVALRILTGFSTGGVGLCAFVLATEPVGPTMRGIAGMSTFYFFSSGIALLSAIAYVFPAWRNLYIASSMPSLAFLLFILPFITESPRWYLVRGRIKEAMKIMSTIATSNGKHLPKEVLLTLDEESSSSASSPPILLSPFSSTALLSKEPLENKAAIMGSLVDVIRSPITRLRLFLMVVINFLCSVVYYGLSLNVVNLETNLYLNVILNAVAEMPAFMITALLLDKLGRKPLTIGTMWFSGFFCFIGSLMGNIGVWKGVRMVCGIMGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAVQMGAILAPIVVVLGGWWPFVVFAFCGMIGGLFAFHLPETLNQPLYDTLAGMEAVENETDAKTTI* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1941 551 SUPERFAMILY MFS general substrate transporter 129 531 IPR036259 -
Dod03g1941 551 ProSitePatterns Sugar transport proteins signature 1. 405 421 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g1941 551 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 41 542 - -
Dod03g1941 551 MobiDBLite consensus disorder prediction 1 22 - -
Dod03g1941 551 Gene3D MFS general substrate transporter like domains 58 535 IPR036259 -
Dod03g1941 551 ProSiteProfiles Major facilitator superfamily (MFS) profile. 59 528 IPR020846 GO:0022857
Dod03g1941 551 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 41 542 - -
Dod03g1941 551 ProSitePatterns Sugar transport proteins signature 2. 193 218 IPR005829 GO:0016021|GO:0022857|GO:0055085
Dod03g1941 551 Pfam Sugar (and other) transporter 130 532 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1941 Dod-Chr3 43188707 43192235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1941 5 548 Organic Solute Cotransporters AT3G20660 63.919 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1941 K08202 - gmx:100805613 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1941 03 43188707 43192235 Dod03g1941 03 43188707 43192235 ECH
Dod10g1101 10 29992230 29997166 Dod03g1941 03 43188707 43192235 PCT