Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0939 ATGACTCTCTCTGTCATTTCCCGCCACCACACCCTCTTCCTCTTGGCCCTGATCCTCTGCGGCCATGCCCACGCTCGCATCATCACTCACCCTTCGTCTTCTTCCTCTGATCTGGTCTCTGATGGAGTCACCAACGCTTCTTCTTCTTTGGAGAAGAACATGCTTCAGCTTCCGACCACCCTGTCGCCGTTTGGGTTCTTGAGGGGTGAATCCACGTGCGAGCAGACCTACGGGTTCTTACCGTGCACCACCACGGTGGTTGGGAACTTGTTCTTGATTGTAGTGTACGGGTATTTGATGTTTATGGCTGCTACGTACTTGTCGAAGGGGAGTGAGCTCTTGCTTGAGATCTTGGGCCCTGGGATCGTTGGTGGCTTGTTCCTTCCTATACTCGGTGCTTTACCTGATGCCATGCTCATTCTAGTATCTGGTCTTTCAGGTAGTAAAGAAGAAGCTCAAAGTCAGGTATCTGTTGGAATGGGCCTGCTAGCTGGGTCAACCGTGATGCTTCTCACTATAATATGGGGGACCTGTGTAATCGTTGGCAAGTGTGACATCGTGAATTCAATTGCATTAGATTCACAAGACACCAGGGGATTCAGTTTAACTGGTTCTGGTGTTAGCACTGACATTTGGACCTGTTATGCTGCAATGATTATGGCTATATCTGTACTTCCATTTGTGATTGTTCAATTACCACAAATTCTCAATTCAACTTCAGGAAGGCACTTGGCTGTTTTGATTGGTCTTATCGTCTCTTTATGTTTATTGGTTGCTTATTGCCTTTATCAGGTTTTCCAACCCTGGATACAAAAGAGAAAACTTGATTACATTAGACACAAGCATGTTATTTTAGGACTTTTGAGACATTTGAAGCAGCATGCATTGGGAAGGCTGCTCAAAGATAATGGTGAACCTGACAAAGAAGTTATTAAAAAGTAA 942 0.4544 MTLSVISRHHTLFLLALILCGHAHARIITHPSSSSSDLVSDGVTNASSSLEKNMLQLPTTLSPFGFLRGESTCEQTYGFLPCTTTVVGNLFLIVVYGYLMFMAATYLSKGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSKEEAQSQVSVGMGLLAGSTVMLLTIIWGTCVIVGKCDIVNSIALDSQDTRGFSLTGSGVSTDIWTCYAAMIMAISVLPFVIVQLPQILNSTSGRHLAVLIGLIVSLCLLVAYCLYQVFQPWIQKRKLDYIRHKHVILGLLRHLKQHALGRLLKDNGEPDKEVIKK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0939 313 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 13 308 IPR004713 GO:0006812|GO:0008324|GO:0016021
Dod10g0939 313 PANTHER - 13 308 - -
Dod10g0939 313 Gene3D - 118 288 IPR044880 -
Dod10g0939 313 Pfam Sodium/calcium exchanger protein 91 267 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0939 Dod-Chr10 27291329 27295144 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g0939 23 313 EF-hand Containing Proteins AT1G53210 66.667 8.15e-139 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0939 - - gmx:100809896 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1204 10 31839032 31847820 Dod10g0939 10 27291329 27295144 ECH
Dod10g0939 10 27291329 27295144 Dod10g0939 10 27291329 27295144 ECH