Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g0908 ATGTCCAGCAAAGGGAAAGATATAGCCGAAGGATCGTCGAGATCCTCGGCTTCTGCTGGCGGTGGTGGTGGCGATGGTGGTGGTGATGATCGGCAACTGCAGCAGCAACAGCAGTTGCCACTGAGCCGGTATGAGTCTCAGAAGAGGAGGGATTGGAACACTTTTGGGCAGTACTTGAGGAATCAGAGGCCTCCAGTGGCACTCTCACAGTGCAATTCCAATCATGTGCTTGAATTCCTTAGGTACTTGGATCAATTTGGGAAAACAAAAGTGCACTCACAAGGGTGCCTTTTCTTTGGACAAACTGAGCCACCAGGACCCTGCACTTGCCCTCTCAAGCAAGCTTGGGGAAGCCTTGATGCACTCATAGGAAGGTTGAGAGCTGCATATGAAGAAAATGGAGGTTTGCCTGAGACAAACCCATTTGCAAGTGGTGCCATAAGAGTTTATCTACGTGAGGTGAGGGACTCTCAAGCTAAGGCAAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGGAATCTAATCAAGGCCAACAATGGGGACACCTCAAACTTACCTATGCAGTAA 570 0.486 MSSKGKDIAEGSSRSSASAGGGGGDGGGDDRQLQQQQQLPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLIKANNGDTSNLPMQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g0908 189 MobiDBLite consensus disorder prediction 1 19 - -
Dod10g0908 189 PANTHER PROTEIN G1-LIKE2 2 189 IPR040222 -
Dod10g0908 189 MobiDBLite consensus disorder prediction 1 47 - -
Dod10g0908 189 MobiDBLite consensus disorder prediction 161 189 - -
Dod10g0908 189 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 189 - -
Dod10g0908 189 ProSiteProfiles ALOG domain profile. 43 170 IPR006936 -
Dod10g0908 189 Pfam ALOG domain 36 156 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g0908 Dod-Chr10 26850644 26853510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g0908 - - gmx:100806493 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g0530 03 6396407 6396988 Dod10g0908 10 26850644 26853510 ECH
Dod10g0908 10 26850644 26853510 Dod03g0530 03 6396407 6396988 ECH
Dod10g0908 10 26850644 26853510 Dod10g0908 10 26850644 26853510 ECH