Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod03g0530 | ATGTCCTCCAATGAAGTGCAAAACGAATTATCAGCTCAAGCCTCATCTTCTTCAAGACCTGCTGCAGATCAACACCACCGTCAACCACCGCAACAGCCGGCGGCGGCCCCGCTTAGCCGGTACGAGTCACAGAAACGGCGAGACTGGAACACTTTCGGGCAGTACCTTAAAAACCAGGCACCACCGGTTTCGCTGTCTCAGTGCAATTTCAACCACGTGCTGGAATTCCTTCGGTACCTCGACCAGTTCGGGAAGACCAAGGTCCACATGCACGGATGCATCTTCTTCGGGCAGCCCGACCCGCCGGCACCCTGCACGTGCCCTCTCCGGCAGGCCTGGGGCAGCCTTGACGCCCTCATCGGGCGTCTCAGGGCTGCCTACGAGGAGCATGGTGGCTCCCCAGAGACTAACCCCTTTGGCAGTGGAGCCATTCGGGTTTACCTTCGTGAAGTGAAGGAGTGTCAGGCAAAGGCAAGAGGAATCCCTTACACAAAGAAAAAGAAGAAGAGGGCTCAAATTAAGGGGACTACTGCTACTACTCATGACACTGCTCCTAAGTCTTTGAAGCAATTGGCTTCTTGA | 582 | 0.5533 | MSSNEVQNELSAQASSSSRPAADQHHRQPPQQPAAAPLSRYESQKRRDWNTFGQYLKNQAPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPETNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRAQIKGTTATTHDTAPKSLKQLAS* | 194 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod03g0530 | 193 | MobiDBLite | consensus disorder prediction | 176 | 193 | - | - | |
| Dod03g0530 | 193 | Pfam | ALOG domain | 32 | 153 | IPR006936 | - | |
| Dod03g0530 | 193 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Dod03g0530 | 193 | PANTHER | PROTEIN G1-LIKE2 | 1 | 180 | IPR040222 | - | |
| Dod03g0530 | 193 | MobiDBLite | consensus disorder prediction | 165 | 193 | - | - | |
| Dod03g0530 | 193 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
| Dod03g0530 | 193 | PANTHER | PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 | 1 | 180 | - | - | |
| Dod03g0530 | 193 | ProSiteProfiles | ALOG domain profile. | 40 | 167 | IPR006936 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod03g0530 | Dod-Chr3 | 6396407 | 6396988 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod03g0530 | - | - | gmx:100306082 | 310.071 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod03g0530 | 03 | 6396407 | 6396988 | Dod03g0530 | 03 | 6396407 | 6396988 | ECH | |
| Dod03g0530 | 03 | 6396407 | 6396988 | Dod10g0908 | 10 | 26850644 | 26853510 | ECH | |
| Dod10g0908 | 10 | 26850644 | 26853510 | Dod03g0530 | 03 | 6396407 | 6396988 | ECH |