Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1868 ATGGCGTTTTTGAGATCTCTTTTGTTCTCTGCAGTTCTTCTTCTGATCCTCATCCATGGCGCTCACTGCTTCTACCTCCCCGGCGTCGCTCCTCAGGACTTCCAAAAGGGAGATCAATTGCAAGTGAAAGTAAACAAATTAACATCAACAAAGACCCAGCTTCCTTACTCATTTTATTCACTTCCTTATTGCCGCCCACATAACATACAGGATAGTGCAGAAAATCTTGGGGAAGTGCTTCGTGGTGACCGCATTGAAAATTCTCTTTATGTGTTCAAAATGCGTGAGCCACAAATGTGCAAGGTTGTGTGTAAGCTTAATCTTGATGCCAAAACTGCTAAGGAGTTCAAAGAGAAGATCAGTGATGAGTATCGGGTGAACATGATCCTTGATAACCTTCCCCTAGTTGTTCCCATCAAAAGGACTGATCAGGATTCTTATGTTTATCAGCTTGGATTCCATGTTGGACTCAAAGGGCAGTATAGTGGGAGCAAGGAGGAGAAGTACTTTATTCACAACCATTTGGCCTTTACTGTCAAGTATCATAGAGATACGGTGACCGAATCTGCTAGAATTGTGGGCTTTGAGGTTAAGCCTTTCAGTGTTAAACATGAATACGAAGGTAAATGGGATGACAAGACTCGTTTAACAACCTGTGACCCTCACACTAAACATACAGTTGTCAACTCCAACAATCCCCAAGAGGTTGAAGAGAACAAGGAAATTATTTTCACATATGATGTTGAATTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAATGATGACCAAATCCACTGGTTCTCAATTGTTAATTCTTTGATGATTGTTCTTTTCCTTTCGGGCATGGTGGCAATGATAATGCTGCGGACATTGTTCCGTGACATTTCAAAGTACAACGAGCTTGAGACCCAAGAAGAAGCCCAAGAAGAGACGGGTTGGAAGCTTGTCCATGGGGATGTGTTTAGGCCCCCTAACAACTCAGATTTGCTCTGTGTTTATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATACTAGTAACCATGATATTTGCTGTCCTTGGGTTCCTTTCACCTTCAAACCGAGGTGGCCTAATGACAGCCATGCTCTTGCTTTGGGTTTTCATGGGAATTTTTGCTGGTTATGCCTCAACTCGCTTATACAAAATGTTCAAGGGATCGGAGTGGAAGAAAATTGCCCTCAGGACTGCAATCGTATTCCCTGGAGTTGTATCTGCCATTTTCTTTGTATTGAACGCTCTCATATGGGGCGAAAAATCATCTGGAGCTGTGCCATTTGGTACAATGTTTGCGCTGATCTTTCTATGGTTTGGGATCTCTGTTCCACTTGTTTTTGTGGGTAGCTATGTTGGATTTAAGAAGCCTGCCATTGAAAATCCTGTGAAGACAAACAAAATACCTAGGCAGATCCCTGAGCAGGCTTGGTACATGAACCCAGTCTTCTCAGTTTTGATCGGTGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGGTTCCTCTTTTTGGTCTTCATTATCCTGATGATCACTTGTGCTGAAATAACCATTGTGCTCTGCTACTTCCAGTTGTGCAGTGAGGATTACTTGTGGTGGTGGCGGTCATACCTCACGTCTGGTTCTTCGGCATTCTACCTCTTTCTTTATGCTACGTTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGCGATTTTATACTTTGGGTACATGCTTATAGTTTCATACGCGTTTTTTGTGGTAACCGGTACTATTGGATTTTATGCATGCCTTTGGTTCACAAGGCTCATCTACTCCTCAGTCAAAATTGATTAG 1911 0.4254 MAFLRSLLFSAVLLLILIHGAHCFYLPGVAPQDFQKGDQLQVKVNKLTSTKTQLPYSFYSLPYCRPHNIQDSAENLGEVLRGDRIENSLYVFKMREPQMCKVVCKLNLDAKTAKEFKEKISDEYRVNMILDNLPLVVPIKRTDQDSYVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDTVTESARIVGFEVKPFSVKHEYEGKWDDKTRLTTCDPHTKHTVVNSNNPQEVEENKEIIFTYDVEFQESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLFRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGVQFFGMILVTMIFAVLGFLSPSNRGGLMTAMLLLWVFMGIFAGYASTRLYKMFKGSEWKKIALRTAIVFPGVVSAIFFVLNALIWGEKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFIILMITCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSAFYLFLYATFYFFTKLEITKLVSAILYFGYMLIVSYAFFVVTGTIGFYACLWFTRLIYSSVKID* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1868 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 7 636 IPR004240 GO:0016021
Dod09g1868 636 Pfam Endomembrane protein 70 55 592 IPR004240 GO:0016021
Dod09g1868 636 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 7 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1868 Dod-Chr9 40310472 40314976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1868 11 636 Miscellaneous Gene Families AT5G10840 85.032 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1868 K17086 - gmx:100780976 1165.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1868 09 40310472 40314976 Dod09g1868 09 40310472 40314976 ECH
Dod08g1759 08 41898392 41903184 Dod09g1868 09 40310472 40314976 PCT