Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1759 ATGTCGTTTCGGAGATCCCTAGCGTTCTCCGCAACACTCTTCCTCTTCTTCTTCTTCTTCTTCCATGGCGCCCTCTCCTTCTACCTCCCCGGCGTCGCACCTCAGGATTTCGAGAAGGGAGATCAATTGCAAGTGAAAGTAAACAAATTATCATCAACAAAGACCCAACTGCCATACACATATTATTCACTTCCATATTGTCGCCCAGGCAAAATATTGGATAGTGCTGAAAATCTTGGTGAGGTGCTTCGTGGTGACCGTATTGAGAATTCTAATTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATGTTGTGTGCAAACTCAAACTTGATGCCAAAACTGCAAAAGAGTTCAAAGAGAAGATTGACGATGAGTACCGGGTGAACATGATCCTAGATAACCTTCCTCTGGTGGTTCCCATAAAACGTGTAGATTCGGACTCTACTATTTATCAGCTTGGTTTCCATGTTGGACTGAAAGGGCAGTATAGTGGGAGCAAGGAGGAGAAGTATTTTATTCACAACCATTTGGCATTTACTGTCAAGTATCATAGAGACTCGCTAACTGAATCTGCTAGAATTGTGGGATTTGAGGTTAAGCCATTCAGTGTTAAACATGAATATGAAGGGAAATGGGATGATAAGACTCGTTTGACAACCTGTGACCCTCATGCTAAGCACACAGTTGTCAACTCCAACACTCCTCAAGAGGTTGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGATTTCGAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTAATGAATGATGACCAAATTCACTGGTTTTCGATTGTGAACTCATTGATGATTGTCCTCTTCCTCTCGGGAATGGTAGCAATGATAATGCTGCGTACACTCTACCGTGATATTTCAAAGTACAATGAGCTTGAGACCCAAGAAGAAGCACAAGAAGAGACTGGTTGGAAGCTTGTCCACGGTGATGTCTTTAGGCCACCAAACAACTCAGAGTTGCTGTGTGTTTATGTTGGAACTGGAGTCCAGTTTTTTGGAATGTTACTAGTGACCATGATCTTTGCCATCCTTGGTTTCCTCTCTCCTTCTAACCGAGGTGGGCTAATGACTGCCATGCTCTTGCTTTGGGTATTCATGGGAATTTTTGCTGGTTATGCTGCATCACGCTTATACAAAATGTTCAAAGGATCAGAGTGGAAGAAAATTGCCCTCAGGACTGCACTCATGTTCCCTGCAGTTGTCTCTGCCATTTTCTTTGTGTTGAATGCTCTCATTTGGGGACAAAAGTCATCCGGAGCAGTGCCATTTGGAACAATGTTTGCTCTGATCTTTTTATGGTTTGGGATCTCTGTGCCACTTGTTTTTGTTGGCAGCTATGTCGGATTCAGGAAGCCCACAATTGAGAATCCGGTAAAGACAAACAAAATCCCAAGGCAGATCCCAGAGCAAGCGTGGTACATGAACCCAGTCTTCTCAGTTCTGATTGGAGGAATCCTCCCATTTGGGGCCGTTTTCATTGAGCTTTTCTTCATCCTCACCTCAATCTGGTTGAACCAGTTCTATTACATCTTTGGCTTCCTCTTCTTGGTCTTCGTCATCCTCATCGTCACCTTGCGCTGA 1641 0.4351 MSFRRSLAFSATLFLFFFFFFHGALSFYLPGVAPQDFEKGDQLQVKVNKLSSTKTQLPYTYYSLPYCRPGKILDSAENLGEVLRGDRIENSNYVFKMREPQMCNVVCKLKLDAKTAKEFKEKIDDEYRVNMILDNLPLVVPIKRVDSDSTIYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTVKYHRDSLTESARIVGFEVKPFSVKHEYEGKWDDKTRLTTCDPHAKHTVVNSNTPQEVEENKEIIFTYDVDFEESDVKWASRWDAYLLMNDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSELLCVYVGTGVQFFGMLLVTMIFAILGFLSPSNRGGLMTAMLLLWVFMGIFAGYAASRLYKMFKGSEWKKIALRTALMFPAVVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGSYVGFRKPTIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTLR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1759 546 Pfam Endomembrane protein 70 58 544 IPR004240 GO:0016021
Dod08g1759 546 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 5 544 - -
Dod08g1759 546 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 5 544 IPR004240 GO:0016021
Dod08g1759 546 SUPERFAMILY MFS general substrate transporter 283 543 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1759 Dod-Chr8 41898392 41903184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1759 2 544 Miscellaneous Gene Families AT5G10840 83.516 0.0 930
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1759 K17086 - gmx:100810506 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1759 08 41898392 41903184 Dod08g1759 08 41898392 41903184 ECH
Dod08g1759 08 41898392 41903184 Dod09g1868 09 40310472 40314976 PCT