Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1796 ATGGATAAAACTGTTCGCATGTGGCAAATTGGTTGTAATCAATGTCTGAGTGTTTTCCATCACAAAGACTATGCAGTGACCTGCATTCAATTCAACCCTGTTGATGAAAATTACTTCATCAGTGGGTCCATAGATGGTAAAGTTCGAATATGGGGGGTACGTGAAGAGCGAGTTGTTGACTGGGCAGACATAAGAGATGTCATAAGTGCTATAAGTTACCAACCAGAAGGAAAAGGTTTTGTAGTTGGTTCACTTACAGGAACATGTCGCTTTTATGTTGCTTCAGGTAAACATTTCCAGCTTGAGGCGCAGATTCATGTCAATGGAAAGAAGAGAACATCAGGCAACAAGATCACTGGCATCCAGTTTTCCAACAAAAACCACCGAAGAGTTATGATCACATCTGGAGATTCCAAAGTTCGAATATTGGAAGGCGTTGAACTTGTTCAAACATATAAAGGCCTTCCAAAGTCAGGAAGTCAGATGTCTGGTTCATTTACATCAAGTGGAAGGCATGTAATTTCAGTTGGAGAGGATTCTCGTGTGTATATTTGGAACTATAATGAGTTTGGAAATGCTTCTTCCAAACAGACAAAATCCAACCATTCATGTGAGTACTTTTCCTCCAAGGGGGTTACTGTTGCAATACCCTGGTCAGGCATGGGTGCAGAAAGTAGGGGCCTCAGCAACAGTTTTGTCCACTATTCTTCAGAAATTCAACACCAATTAGAGGCTGCTCCCAGGGCTAGAGAGTCGGAACATTTTTCATTTGGTAGTTGGTTCTCCATTGATGGTACATGCCGAGGTTCTATGACATGGCCTGAGGAGAAGCTTCCCATTTGGGATTTACCTCTTGTGGAGCATGAATTTGATCACCAGCAGCTGTGTGTCAAAGAATCTTGCAATGACAATCGTGTATCAGGAACATGGGGACTATCAATTGTGGCTGCTTGTTGTGATGGAACTATCAAAACATTCCACAACTTTGGATTGCCTGTTAGGCTTTAG 1008 0.4216 MDKTVRMWQIGCNQCLSVFHHKDYAVTCIQFNPVDENYFISGSIDGKVRIWGVREERVVDWADIRDVISAISYQPEGKGFVVGSLTGTCRFYVASGKHFQLEAQIHVNGKKRTSGNKITGIQFSNKNHRRVMITSGDSKVRILEGVELVQTYKGLPKSGSQMSGSFTSSGRHVISVGEDSRVYIWNYNEFGNASSKQTKSNHSCEYFSSKGVTVAIPWSGMGAESRGLSNSFVHYSSEIQHQLEAAPRARESEHFSFGSWFSIDGTCRGSMTWPEEKLPIWDLPLVEHEFDHQQLCVKESCNDNRVSGTWGLSIVAACCDGTIKTFHNFGLPVRL* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1796 335 ProSiteProfiles Trp-Asp (WD) repeats profile. 19 61 IPR001680 GO:0005515
Dod09g1796 335 SUPERFAMILY WD40 repeat-like 2 325 IPR036322 GO:0005515
Dod09g1796 335 SMART WD40_4 145 186 IPR001680 GO:0005515
Dod09g1796 335 SMART WD40_4 54 93 IPR001680 GO:0005515
Dod09g1796 335 SMART WD40_4 12 52 IPR001680 GO:0005515
Dod09g1796 335 SMART WD40_4 98 144 IPR001680 GO:0005515
Dod09g1796 335 Gene3D - 1 226 IPR015943 GO:0005515
Dod09g1796 335 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 1 335 - -
Dod09g1796 335 PANTHER WD REPEAT DOMAIN 44 1 335 IPR040324 -
Dod09g1796 335 Pfam WD domain, G-beta repeat 14 51 IPR001680 GO:0005515
Dod09g1796 335 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 19 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1796 Dod-Chr9 39557967 39561345 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1796 K20241 - gmx:100780979 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g2517 04 49010462 49016755 Dod09g1796 09 39557967 39561345 PCT