Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1473 ATGGCTAACAATGCGACTGCGTGTGCTGAGAGAGCAACCAGTGACATGCTCATTGGTCCTGACTGGGCGATTAACCTTGAGTTGTGTGATATCATCAATATGGACCCCAGGCAAGCAAAAGATGCGTTAAAGATACTTAAGAAGCGTTTGGGCAGTAAAAATCCCAAGATACAACTTCTGGCGCTTTTTGTACTGGAGACCCTTAGTAAAAATTGTGGGGAAAGTGTATTTCAGCAGATCGTTGAAAGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCGGACTTAAATGTGAGGGAAAAGATATTAATTTTAATTGATACGTGGCAAGAAGCTTTTGGGGGCCCAACTGGAGTTTATCCCCAATACTATGCAGCATATAATGAATTAAAGTCTGCTGGAGTTGAATTTCCACCACGAGCAGAGAGCAGTGTGCCATTCTTCACTCCTCCTCAAACCCAGCCAGTTGTGCATGCTGCTGCAGAATATGATGATGATGCTGCTGCTATTCAGGCTTCTCTTCATTCAGATGAATCTGGGCTTAGTCTGCCAGAGATTCAAAATGCTCAAGGACTAGCTGATGTATTGATGGAAATGCTTAGTGCCTTGAATCCTAAGGACTCCAAGGGTGTGAAGGATGAAGTAATCGTCGATCTTGTTGACCAGTGCCGTTCTTATCAAAAGCGTGTGATGCTTCTTGTGAACAATACTGTGGATGAGCAGCTTTTAAGTCAGGGATTGGCACTAAATGACAGTCTACAGCGAGTACTCTGTAAGCATGATGATATTGCAAGTGGAACTGCTGATACAGGTGCAAGAGGAACAGAGACTTCAGCCCTGCCACTTGTGAATGTAAACCATGAGGATGATGAGTCAGAGGATGATTTTGCTCAACTAGCCCACAGGCCATCACGTGACAATCATGCACAGAACTGGAAACCAGCGTATGACAAGGCAGAACCAGCGAGGATAAACTCATTTCTTCCCCCACCTCCAGCATCAAGGAATCCAGTCTACACTGACACTGGCATGGTTGACTATCTCAGTGGTGATGCATATAAATCAGAATACACTGAGAGCTCAAAACAGACTTCATCTGCCGTGCCTCCTCATTCTAGCCCTAATCCTACCTCATCAACGAGTCCCACACGGTCTTCCTCACCCCCTACTAATCCATTTTTCAGACAGCCTGTCTATGATGAGCCGTCTCCCATGAAAAAATCTTCAGAACAGCTGCCTCCAGCTCACTGGGACACACAGTCTCCTGCCATCCTTCCCCCTCCTCCTTCCAAGCACAATCAGAGACAACAATTTTTTGAGCAACAAGGGGGGACTCTTTCAAGCAGTGGATCCAGTTCCTCTTATGACAGCTTGGTTGGACAAACACAGAATATGTCTCTGAATTCATCCACCCCAACCAAACAACAGAAGCCAGAAGATGCCCTTTTCAAAGATTTAGTTGATTTTGCTAAATCCAAAACCTCTTCATCTTCTAAACCAAATAGGTCATATTGA 1524 0.4462 MANNATACAERATSDMLIGPDWAINLELCDIINMDPRQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIVERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGPTGVYPQYYAAYNELKSAGVEFPPRAESSVPFFTPPQTQPVVHAAAEYDDDAAAIQASLHSDESGLSLPEIQNAQGLADVLMEMLSALNPKDSKGVKDEVIVDLVDQCRSYQKRVMLLVNNTVDEQLLSQGLALNDSLQRVLCKHDDIASGTADTGARGTETSALPLVNVNHEDDESEDDFAQLAHRPSRDNHAQNWKPAYDKAEPARINSFLPPPPASRNPVYTDTGMVDYLSGDAYKSEYTESSKQTSSAVPPHSSPNPTSSTSPTRSSSPPTNPFFRQPVYDEPSPMKKSSEQLPPAHWDTQSPAILPPPPSKHNQRQQFFEQQGGTLSSSGSSSSYDSLVGQTQNMSLNSSTPTKQQKPEDALFKDLVDFAKSKTSSSSKPNRSY* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1473 507 Gene3D - 177 275 IPR038425 -
Dod09g1473 507 PANTHER TOM1-LIKE PROTEIN 4 1 506 - -
Dod09g1473 507 MobiDBLite consensus disorder prediction 358 396 - -
Dod09g1473 507 PIRSF TOM1 1 506 IPR014645 -
Dod09g1473 507 CDD GAT_GGA_like_plant 188 266 - -
Dod09g1473 507 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Dod09g1473 507 PANTHER TOM1-LIKE PROTEIN 1 506 IPR044836 GO:0035091|GO:0043130|GO:0043328
Dod09g1473 507 SUPERFAMILY GAT-like domain 145 269 - -
Dod09g1473 507 MobiDBLite consensus disorder prediction 358 507 - -
Dod09g1473 507 SUPERFAMILY ENTH/VHS domain 3 142 IPR008942 -
Dod09g1473 507 MobiDBLite consensus disorder prediction 493 507 - -
Dod09g1473 507 Pfam VHS domain 9 134 IPR002014 GO:0035091|GO:0043130
Dod09g1473 507 CDD VHS 5 135 - -
Dod09g1473 507 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Dod09g1473 507 Pfam GAT domain 195 268 IPR004152 GO:0035091|GO:0043130
Dod09g1473 507 Gene3D - 2 158 IPR008942 -
Dod09g1473 507 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Dod09g1473 507 MobiDBLite consensus disorder prediction 433 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1473 Dod-Chr9 36322326 36330404 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1473 - - gmx:100792343 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1536 08 34776831 34787224 Dod09g1473 09 36322326 36330404 PCT