Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1310 ATGGCAGGGAAGGTCAAGAACAAGGTGGAGATTGACTTGGGTTGCGGTATCATGGGAAAAATTTTCCAACGCAAAAGCAATAATAAGCTGAGAAATTCATCTGTTCATTCGCTGCCTATGAAGGCTAGCAATAGCATTGGCAAAAATCCGCAACAGAGCAATCAGAACCTTCCGAATCTTGAACCAAAGGTTGTTCCAAGTCCAAGAAATAGCCTCAGTGAACCTCTTCAGACATTGAAAGAGGACCAGAAACCGGCCAGAAAGAGCGCCACTGGTCATGGAGCACCTTCTGCATATCGAAACAACCAGAATCGGAGACCTTCAGATGCTGCTGCAAGAACCTCAACATCATCGTCATCATCATCATCAGGAGGTAACTCAAGCCACACGAAGGCTCAACACAACCAGGACTCGAATGATGAGAGCAAGCAACACAGAGAACCCACTCGTAATTCTCTGCAACTTGCTAGGATAAGTACTAGTCGTCACCACAAAGACAACGAGATTAAATCCCCAGCCAAAGACTTAGGTACCCCTTTGAGGCTTACCGGGAAATTGCTTGTTAATAACAGCCCAAGAAATAGTGTTACCAAGAACAAAGAGTTGAACACTATGTCCCCTTGTTATAGTAATGCCAACAAAGGCTTAGTTATTGGGAATATCATGAAGAGGAACAGCGATGAGCTTGCCCAGTTTCGAAGCCCAAGGAATAGAGTGGATCCTGAGGCTTTGAAGGGCATGGGAAATGAAGCATACAAGCAGGGAAGATTTGGAGAGGCTTTGGCTTTGTATGACAGAGCCATCGCTCTTGACTCCAATAAGGCAACGTATCATTGCAATAAGAGTGCGGCTTTAATTTCCTTGGGAAGGATTATGGAGGCATTTGAGGAGTGCGAGGAAGCTATCAGGTTGGAGCCTTCTTATGGCAGAGCCCACAATCGTTTGGCAACAATATATTTCAGATTGGGGGAAGCAGAAAAGGCACTGGCTTGCAATGAGGCAACAGCATATGTTGATCCCGAACTTGCCTTCCAAGCTCAGGCTCTTCAGAATCACCTTACCATATGCACTGAAGCTCGGAAAGTCAATGACTGGAAACTTGTACTAAAGGAAACACAGTCTGCACTATCCTTAGGAGCTGATTCAGCTCCACAGGTTTATGCTTTACAAACTGAAGCCTTGCTGAAGCTCCTAAGACATCAAGAGGCATATGCCACTTACGAGAAAATGCCAAAATTTGACCGTGATTGGTGCAACAAATTATTTGGCCTGGCTAGTAGCGCTTACCTTTTGATGATAGGCGCACAAGTTTATTTGGCAGCTGGCAGGTTTGAGGATGCTATGACAGCATGTCAGCAAGCAGCTAAACTTGATCCCAGCAACAGTGAGGTGAATGCAGTGGTAAGGAGGGCCAAAGCAGCAACATCAGCCAGAATGAGCGGTAACTTGCTCTTCAAGGCATTGAAATTCATGGAAGCATGCGCGGTATACAACGAAGGATTAGACCATGATCCATACAACTCAGTTCTGCTCTGCAACAGGGCAGCATGCCGTTCTAAACTAGGCCAATTCGAGAAAGCAATTGAAGATTGCAACGCAGCCCTTATGGTTCAGCCTAGTTATAGCAAGGCAATGTTGCGGAGGGCAGATTCCAATGCCAAGTTGGAACGCTGGGAGGCCGCAATTCAAGACTATGAAACGCTCATAAGAGAAAAACCAGGGGATGAGGAGGTGGCCAGGGCTCTGTTTGAGGCCCAGCTCCAACTCAAGATGCTGCGCGGTGAAGACATTAAGGACTTGAAATTTGGTTCAAATTTGGTTTTCATATCAAGCAATGATCGGTTTAGACATTATGTAACTTCACCTGGTATGTCTGTGGTGCTGTTTTGCAACAAGGCAACCCACAAGCAAGTATTGCTGGTGTTAGAGCAAACCTGCAAGCGATTCCCATCAGTTAATTTCCTTAAGGTGGAGATTGAAGATCACCCCTACTTGGCGAAATCAGAAGGTGTGAACTCTATACCAGCCTTCAAAATATACAAGAATGGATCAAGGGTCAAAGAAATTCCTGGCAACAACCACGAGTTGTTAGAAAGATCAGTTAAATTATATAGCAGCTGA 2121 0.4531 MAGKVKNKVEIDLGCGIMGKIFQRKSNNKLRNSSVHSLPMKASNSIGKNPQQSNQNLPNLEPKVVPSPRNSLSEPLQTLKEDQKPARKSATGHGAPSAYRNNQNRRPSDAAARTSTSSSSSSSGGNSSHTKAQHNQDSNDESKQHREPTRNSLQLARISTSRHHKDNEIKSPAKDLGTPLRLTGKLLVNNSPRNSVTKNKELNTMSPCYSNANKGLVIGNIMKRNSDELAQFRSPRNRVDPEALKGMGNEAYKQGRFGEALALYDRAIALDSNKATYHCNKSAALISLGRIMEAFEECEEAIRLEPSYGRAHNRLATIYFRLGEAEKALACNEATAYVDPELAFQAQALQNHLTICTEARKVNDWKLVLKETQSALSLGADSAPQVYALQTEALLKLLRHQEAYATYEKMPKFDRDWCNKLFGLASSAYLLMIGAQVYLAAGRFEDAMTACQQAAKLDPSNSEVNAVVRRAKAATSARMSGNLLFKALKFMEACAVYNEGLDHDPYNSVLLCNRAACRSKLGQFEKAIEDCNAALMVQPSYSKAMLRRADSNAKLERWEAAIQDYETLIREKPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVFISSNDRFRHYVTSPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVNSIPAFKIYKNGSRVKEIPGNNHELLERSVKLYSS* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1310 706 SUPERFAMILY TPR-like 476 590 IPR011990 GO:0005515
Dod09g1310 706 Coils Coil 548 568 - -
Dod09g1310 706 MobiDBLite consensus disorder prediction 24 180 - -
Dod09g1310 706 MobiDBLite consensus disorder prediction 25 61 - -
Dod09g1310 706 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 705 - -
Dod09g1310 706 SUPERFAMILY Thioredoxin-like 575 697 IPR036249 -
Dod09g1310 706 MobiDBLite consensus disorder prediction 95 133 - -
Dod09g1310 706 CDD TRX_family 615 693 - -
Dod09g1310 706 Pfam Tetratricopeptide repeat 510 541 IPR001440 GO:0005515
Dod09g1310 706 SMART tpr_5 542 575 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 309 342 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 241 274 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 474 507 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 275 308 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 428 461 IPR019734 GO:0005515
Dod09g1310 706 SMART tpr_5 508 541 IPR019734 GO:0005515
Dod09g1310 706 Pfam Thioredoxin 636 697 IPR013766 -
Dod09g1310 706 Pfam Tetratricopeptide repeat 435 507 - -
Dod09g1310 706 ProSiteProfiles TPR repeat profile. 428 461 IPR019734 GO:0005515
Dod09g1310 706 SUPERFAMILY TPR-like 240 463 IPR011990 GO:0005515
Dod09g1310 706 MobiDBLite consensus disorder prediction 134 150 - -
Dod09g1310 706 Gene3D Glutaredoxin 601 705 - -
Dod09g1310 706 ProSiteProfiles TPR repeat profile. 241 274 IPR019734 GO:0005515
Dod09g1310 706 Pfam Tetratricopeptide repeat 311 340 IPR019734 GO:0005515
Dod09g1310 706 Pfam TPR repeat 248 284 - -
Dod09g1310 706 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 705 IPR044534 -
Dod09g1310 706 Gene3D Tetratricopeptide repeat domain 239 593 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1310 Dod-Chr9 34228351 34232520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1310 K09527 - gmx:100814381 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1276 08 18199185 18200007 Dod09g1310 09 34228351 34232520 PCT