Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1276 ATGCTACGTAGTGAGGATATCAAGGACATGAAATTTGGTTCAAATTTGGTTTTCATCTCAAGCAATGATCGGTTTAGACATTATGTAACCTCACCCGGTAAGGCACATTGGTCTGCATCTCTCATAAACGTAACAGTATTAGCATTACAAATGAGTCTTAACAGTTGTATGGGTTATTCAACAGAGATGGCAGTGGTGCTCTTTACCAACAAGGCAGCCCACAAGCAAGTATTGCTGGTGTTGGAGCAAATTAGCAAGAGATTCCCATCAGTAAATTTCCTCAAGGTGGAAATTGAAGACCACCCTTACTTAACTATATCAGAAGGTGTGAGCTCTATTCCAGCCTTCAAAATATACAACAACGGGTCAAGGGTAAAAGAAATTTCGGGCAACAACCACGAGATGTTAGAAAGATCAGTTCAATTGTATAGCAGCTGA 438 0.4018 MLRSEDIKDMKFGSNLVFISSNDRFRHYVTSPGKAHWSASLINVTVLALQMSLNSCMGYSTEMAVVLFTNKAAHKQVLLVLEQISKRFPSVNFLKVEIEDHPYLTISEGVSSIPAFKIYNNGSRVKEISGNNHEMLERSVQLYSS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1276 145 Pfam Thioredoxin 80 138 IPR013766 -
Dod08g1276 145 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 60 143 IPR044534 -
Dod08g1276 145 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 60 143 - -
Dod08g1276 145 CDD TRX_family 75 141 - -
Dod08g1276 145 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 1 34 IPR044534 -
Dod08g1276 145 Gene3D Glutaredoxin 60 144 - -
Dod08g1276 145 SUPERFAMILY Thioredoxin-like 75 138 IPR036249 -
Dod08g1276 145 PANTHER 43KDA POSTSYNAPTIC PROTEIN-RELATED 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1276 Dod-Chr8 18199185 18200007 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1276 K09527 - gmx:100782846 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1276 08 18199185 18200007 Dod08g1276 08 18199185 18200007 ECH
Dod08g1276 08 18199185 18200007 Dod09g1310 09 34228351 34232520 PCT