Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1265 ATGGCTTTCTCCAATGCCTTGGTTCTAGGCCTTTTTGTAGCAATCGGCATGGCCATGCCAACCCTGGCAACTGTCTACACTGTAGGAGATACCTCAGGTTGGGCCATTGGTGGTGATTATAGCACATGGGCTAGTGACAAGACCTTTGTAGTAGGTGATAGCCTTGCTTTCAACTATGGAGCTGGGCACACAGTGGATGAGGTAAAAGAGAGTGACTACAAATCATGCACCACAGGCAATTCAATTAGTACAGATAGCAGTGGTGCCACCACCATTGCCCTCAAGACTGCAGGCACTCACTACTTCATATGTGCTGTTCCTGGACACTGTTCTGGTGGCATGAAGCTTGCAGTTACTGTGAAGGCTGGAACATCCACTACTCCTTCTACAACACCTTCATCATCATCAGGGAAGGGTTCACCTTCTGATGGAAGCACCACAGCCACACCAAGCAGCACTACCACCACCACCACTTCTTCCACTAAATCAGATGCTTCTTCAGTGAGTAGGTTCACACCAATTGTTATGTTGATTGTTTCTTGGATCTCATACTGTGTTTTGCGCATGGTATGA 573 0.4747 MAFSNALVLGLFVAIGMAMPTLATVYTVGDTSGWAIGGDYSTWASDKTFVVGDSLAFNYGAGHTVDEVKESDYKSCTTGNSISTDSSGATTIALKTAGTHYFICAVPGHCSGGMKLAVTVKAGTSTTPSTTPSSSSGKGSPSDGSTTATPSSTTTTTTSSTKSDASSVSRFTPIVMLIVSWISYCVLRMV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1265 190 Pfam Plastocyanin-like domain 37 114 IPR003245 GO:0009055
Dod09g1265 190 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Dod09g1265 190 CDD Phytocyanin 24 120 - -
Dod09g1265 190 Gene3D - 22 127 IPR008972 -
Dod09g1265 190 PANTHER BLUE COPPER PROTEIN 8 182 IPR039391 GO:0009055
Dod09g1265 190 ProSitePatterns Type-1 copper (blue) proteins signature. 98 114 IPR028871 -
Dod09g1265 190 PANTHER BLUE COPPER PROTEIN-LIKE 8 182 - -
Dod09g1265 190 MobiDBLite consensus disorder prediction 123 165 - -
Dod09g1265 190 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1265 Dod-Chr9 33755403 33756497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1265 31 125 Miscellaneous Gene Families AT1G22480 65.263 1.20e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1265 - - gmx:100306522 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1235 08 16928482 16931546 Dod09g1265 09 33755403 33756497 PCT