Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1247 ATGTCGTCCAATTCGCACAGAGCAGGTTCCTTCTACGGTGATGCTGCCCCGTACCGGTCCAGAGAGGGGCTTAGCACGAGACCCGTTGCTTCCTCCGATGAAATCCAATTGCGCATTGATCCCATGGACATGGACTTGGACAACGAAATCTCCGGTCTTCGCGGCCAAGTTAAAAAGCTCAGAAATGTTGCTGAAGAGATAGGAACAGAAGTCAAGTATCAGAAAGATTTTCTGGAACAGCTGCAAATGACAATGATGAAGGCTCAAGCTGGGGTGAAGAATAATTTAAGAAGACTAAACAAGAGCATAATCCGAAGTGGTTCAAATCATATTGTTCATGTGGTTGTTTTTGCATTAGTGTTGTTCTTTGTAGTGTACTTTTGGTCAAAGATGTTCAGAAAATGA 405 0.437 MSSNSHRAGSFYGDAAPYRSREGLSTRPVASSDEIQLRIDPMDMDLDNEISGLRGQVKKLRNVAEEIGTEVKYQKDFLEQLQMTMMKAQAGVKNNLRRLNKSIIRSGSNHIVHVVVFALVLFFVVYFWSKMFRK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1247 134 SUPERFAMILY SNARE fusion complex 33 101 - -
Dod09g1247 134 CDD SNARE_Qc 45 101 - -
Dod09g1247 134 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 133 - -
Dod09g1247 134 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 40 102 IPR000727 -
Dod09g1247 134 Gene3D - 42 102 - -
Dod09g1247 134 PANTHER GOLGI SNARE BET1-RELATED 9 133 IPR039897 GO:0015031|GO:0030173
Dod09g1247 134 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1247 Dod-Chr9 33578033 33580863 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1247 K08505 - gmx:100787783 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1222 08 16448816 16451900 Dod09g1247 09 33578033 33580863 PCT