Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1222 ATGGCCGCCAATTCCCACAGGGCGGGCTCTTTCTACGGCGACGCTGCTCCTTTCAGATCAAGAGAAGGGCTTAGCACCCGACCCGTTTCTGGGTCCGAGGAAATCCAATTGCGTATTGATCCCTTGGACTTAGACGATGAGCTCACCGGTCTTCATCGCCAAGTTAGGAGGTTAAAACATGTTGCGGAGGAGATTGGAACAGAAGTGAAGTATCAGAAAGATTTTCTGGAACAGCTGCAAATGACAATGCTAAAGGCTCAAGCTGGGGTGAAGAATAATCTAAGAAGATTGAACAAGAGCATCATCCAAAATGGTTCGAATCACATTGTTCATGTCGTTATTTTTGCGTTAGTCTGTTTTTTCGTGGTGTACCTTTGGTCCAAGATGTCCAGAAACTGA 399 0.4612 MAANSHRAGSFYGDAAPFRSREGLSTRPVSGSEEIQLRIDPLDLDDELTGLHRQVRRLKHVAEEIGTEVKYQKDFLEQLQMTMLKAQAGVKNNLRRLNKSIIQNGSNHIVHVVIFALVCFFVVYLWSKMSRN* 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1222 132 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 9 131 - -
Dod08g1222 132 Gene3D - 43 100 - -
Dod08g1222 132 SUPERFAMILY SNARE fusion complex 43 99 - -
Dod08g1222 132 CDD SNARE_Qc 43 99 - -
Dod08g1222 132 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 45 100 IPR000727 -
Dod08g1222 132 PANTHER GOLGI SNARE BET1-RELATED 9 131 IPR039897 GO:0015031|GO:0030173
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1222 Dod-Chr8 16448816 16451900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1222 K08505 - gmx:100306642 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1222 08 16448816 16451900 Dod08g1222 08 16448816 16451900 ECH
Dod08g1222 08 16448816 16451900 Dod09g1247 09 33578033 33580863 PCT