Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0996 ATGGCTCACGAGTTTCATAACGGATATGAAGATTTTGAATTGATACTTTTTTCGTTTGTTTTTTACCTCAGAAAGTTAAGATGTGCCATTGTCATGGTTAGATTGTATTGTAGGATGAGTAGACCAACAACGCGAAGTAAAAATAAAAGACATAGACAGGGGGATGATGGCACTGGCACTTCTGAAATATGGAGGAGAATTCACAAAACAGGTGCGGTTACAGAAGATGATATGAATCAATTGTATATGATTTGGAAGCCGGTTTGTTCAGGTTGTCGTGTAAATACCAAAGATAACCCGAATTGCTTCTGTGCATTGGTTCCACCTTCAAATGGATCCCGGAAGTCTGGCTTATGGCAGAAAGTGTCTGATTTTGTTGAAAGTCTCGGCCCTGATCCAACCAAGGATCTTCGTGCCTCTGCTAATTCTCCTGCAGGTCTGACTAATCTTGGTGCGACGTGTTATGCTAACAGTATACTCCAGTGCTTGTACATGAATAAAGCTTTCCGAGAAGGCATATTTTCTGTAGAACCGGATGTTCTACAACAGCAGCCGGTGTTAGATCAGCTGGTTCGGCTTTTTGTGCAGTTGCATGTTAGTAAAATGGCTTTCATAGATTCTTCTCCATTTGTAAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCACGAGTTCCTGACATTGCTTTTGTCGTTGCTTGAGCGATGTCTGAGCCATTCCAAAGTTCCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCATGTGACAACGTGCTCAAATTGTGGAAAAGATTCTGAAGCTTCTTCCAAAATGGAAGATTTCTATGAGTTGGAGTTGAATGTCAAGGGATTGAAAAGTTTAGATGGGAGCCTAGATGATTACCTCAGTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTGATTCATGTCAAACAAGAGTTGATGCTACTCGCAGCATCAAGCTGCGTACATTACCTGACGTACTTAATTTTCAACTTAAACGTTGTGTCTTCCTTCCAAAGACTACAACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCAGCTGAACTTGATATGCGGCATAGATTGTCTGAGTTGTCTCAATTTGATTTGATATATGACTTGTCAGCTGTACTGATTCACAAGGGAACGGGTGTTAACAGTGGCCATTACATTGCTCACATCAAGGATGAAAACACTGGGCAGTGGTGGGAATTTGATGATGAGCATGTCACTAATTTGGGTAACCATCCCTTTGGCGAAGGATCTTCGAGTTCAACTCCTAAATCTGTTAAGACTGATGCAGGTCATTCTGATAGCTTCAAAGCAAGGATGGCTGACAGTAATGGAAACAGTTTAGATGACACTCATTCACATTCATCACTTGTGGAGACATTTTCTTCTAGTGATGCATACATGTTGATGTACCATCTTAAACATACAAAAGATGTATGTGAAAATGGGGATATAGTTATTGGTGCTAACCATGAAGCAAGAGAGGATACTGCACAAGACAGTGCTCCTTTTCCTTCTCATCTTTTTGACGAGATTCAAAATTTTAATGCATCATATCTTGATGCTTGTGAGCAGTACAATCGTAGGAAAGAGTTAGAATTGAGTCATATTAATGAGAGGAGACAGGAAGTTCGATCTGTTATAGCCGAAGCTCCTGTCCAACCACTGGAGCAACCATTTTATTGGATTTCTAGTGATTGGCTTCGCCAGTGGGCTGACAACGTTATTCCAACTTCTCTTGACAACACATCTATCCAATGTCCACACGGGAAGGTCTCAGCTTCAAAGGTTGCCTCAATGAAGCGATTGTCAGCTAAAGCACGGGATAAGTTGTTTTCTAAGTATGGTGGGGGGCCAGTGCTGTCTCATGATGACCACTGTTGGGATTGCCTATTTCTTGAGGCTCGCACAGTGGTTTCAGCTGACACCTATCGGGATAGAAGAGAATCAATGAAGTTACTTGCACGGGATATTCTAGATGGAAACTGTTTAGATGGAAAATTTTACATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTCTTGATGCTCCATCTGAAGGTGATGCTGGACTAACTGCAGCCATTTGTTGTCCACATGAGCAACTGATGCCCGAGCAAGCTGCTGGTGCCAAGCGGGTTCTAATTCCTGAGAGCTTTTGGCTCTTCTTATATGAAGATGCTGTTTCTGTGAAGCCCGATGATCCCTTGGGTGGTCCTACTTTTTCTTCTGACTCCATAGAGTGTTCCAAATGCAGTAATGAATTATCTGAAGTAGCATCCTTGGAGGACTCCTTAAGATCAGTTAAACAAATGCAACGTCAGAACCATGAGAAATTATTCCAGGCTAGAAATATGCCACTGTCTGTTCATTGCAAGTATTTCTTGGTGCCTTCTTCATGGATTTCAAAATGGAGAAATTACATTAGTCCAGCTCTCAAGAATTCAGATAAACCTGAACCTTTAGATGGGGTAATTGATTCACTAATTTGTGAAAAGCACTCACACCTTGTTGAAAGACCTCCTGAACTGGTTTTCAGACGTGGTGCTATATTCCAGAGAGAGTCTTCTGCTGCTGGCTTAACCATCATATCTGAGAATGATTGGAAATGCTTCTGTGAAGAGTATGGTGGTATTGAGACCAAAGGAATATCTGCAACAATTGAGATTGTTAATGATTCAGAGAATGTTCTGACTGGATCGGGTGAAGAGATGCTGATATGTGAAGATCAGTTGGTCACTGGGGATAAATTGAGTAATGAAAATGGGACTGGACAAATTTTGGTTAAGACATGTCCTGAGGTTTGTGAAAATTGCATTGGAGAAAGAGAGAGTTGTGAGTTAATGCAGAAACTTAACTATTGCAATGAGAACATAAGTGTAATCCTTGTTCGTGGTAAGGAGGTACCTAGATCAATCTTGGAAGCTTCAAAGGGATCTGTTGAAACAGATCGTCGGGTTTCCAAGCGCTCACGGAAGACTAAAAATGGGAGTTCAATCAGTTTGAAAGTTTCTGCTTCAACATCTCTATACCAACTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACAGAAAGGTGACCGGACAATTGATATTGATGACGAATGTGCTACCCTTGCGGATGTAAACATATTTGCTGGAGATCAAATTATAGTGAGGGACTCTGAGATCCACGAAAATCGAGATATTGCTGATGAGCTTTGTGATGAGAAAATGGATCTGCAGCATACCGAGGAAGGATTCCGGGGAACACTTCTGACAGCAAACTATTCATCTCAGGCTGTCTAA 3357 0.412 MAHEFHNGYEDFELILFSFVFYLRKLRCAIVMVRLYCRMSRPTTRSKNKRHRQGDDGTGTSEIWRRIHKTGAVTEDDMNQLYMIWKPVCSGCRVNTKDNPNCFCALVPPSNGSRKSGLWQKVSDFVESLGPDPTKDLRASANSPAGLTNLGATCYANSILQCLYMNKAFREGIFSVEPDVLQQQPVLDQLVRLFVQLHVSKMAFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTIVQDLFRGSVSHVTTCSNCGKDSEASSKMEDFYELELNVKGLKSLDGSLDDYLSVEELHGDNQYFCDSCQTRVDATRSIKLRTLPDVLNFQLKRCVFLPKTTTKKKITSAFSFPAELDMRHRLSELSQFDLIYDLSAVLIHKGTGVNSGHYIAHIKDENTGQWWEFDDEHVTNLGNHPFGEGSSSSTPKSVKTDAGHSDSFKARMADSNGNSLDDTHSHSSLVETFSSSDAYMLMYHLKHTKDVCENGDIVIGANHEAREDTAQDSAPFPSHLFDEIQNFNASYLDACEQYNRRKELELSHINERRQEVRSVIAEAPVQPLEQPFYWISSDWLRQWADNVIPTSLDNTSIQCPHGKVSASKVASMKRLSAKARDKLFSKYGGGPVLSHDDHCWDCLFLEARTVVSADTYRDRRESMKLLARDILDGNCLDGKFYISRPWLQQWWKRKVLDAPSEGDAGLTAAICCPHEQLMPEQAAGAKRVLIPESFWLFLYEDAVSVKPDDPLGGPTFSSDSIECSKCSNELSEVASLEDSLRSVKQMQRQNHEKLFQARNMPLSVHCKYFLVPSSWISKWRNYISPALKNSDKPEPLDGVIDSLICEKHSHLVERPPELVFRRGAIFQRESSAAGLTIISENDWKCFCEEYGGIETKGISATIEIVNDSENVLTGSGEEMLICEDQLVTGDKLSNENGTGQILVKTCPEVCENCIGERESCELMQKLNYCNENISVILVRGKEVPRSILEASKGSVETDRRVSKRSRKTKNGSSISLKVSASTSLYQLKMMIWESFGVVKENQILQKGDRTIDIDDECATLADVNIFAGDQIIVRDSEIHENRDIADELCDEKMDLQHTEEGFRGTLLTANYSSQAV* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0996 1118 ProSiteProfiles DUSP domain profile. 656 763 IPR006615 GO:0004843
Dod09g0996 1118 SUPERFAMILY DUSP-like 553 641 IPR035927 -
Dod09g0996 1118 SUPERFAMILY DUSP-like 793 893 IPR035927 -
Dod09g0996 1118 Gene3D Cysteine proteinases 131 488 - -
Dod09g0996 1118 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 145 488 IPR028889 -
Dod09g0996 1118 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 382 400 IPR018200 GO:0004843|GO:0006511
Dod09g0996 1118 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 40 1088 - -
Dod09g0996 1118 SUPERFAMILY Ubiquitin-like 1011 1077 IPR029071 -
Dod09g0996 1118 CDD Peptidase_C19L 146 485 IPR033841 GO:0004843
Dod09g0996 1118 Gene3D - 1007 1078 - -
Dod09g0996 1118 ProSiteProfiles DUSP domain profile. 549 641 IPR006615 GO:0004843
Dod09g0996 1118 MobiDBLite consensus disorder prediction 426 443 - -
Dod09g0996 1118 Pfam Ubiquitin carboxyl-terminal hydrolase 146 485 IPR001394 GO:0004843|GO:0016579
Dod09g0996 1118 MobiDBLite consensus disorder prediction 424 467 - -
Dod09g0996 1118 MobiDBLite consensus disorder prediction 453 467 - -
Dod09g0996 1118 SUPERFAMILY Cysteine proteinases 143 492 IPR038765 -
Dod09g0996 1118 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 40 1088 - -
Dod09g0996 1118 ProSiteProfiles DUSP domain profile. 784 904 IPR006615 GO:0004843
Dod09g0996 1118 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 146 161 IPR018200 GO:0004843|GO:0006511
Dod09g0996 1118 CDD Ubl_USP48 1008 1109 IPR044743 GO:0004197|GO:0004843|GO:0016579
Dod09g0996 1118 SMART dusp 567 638 IPR006615 GO:0004843
Dod09g0996 1118 Gene3D - 778 900 IPR035927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0996 Dod-Chr9 30291845 30300240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0996 143 423 Miscellaneous Gene Families AT4G31670 29.568 1.08e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0996 - - gmx:100815770 1863.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1612 08 37684176 37697892 Dod09g0996 09 30291845 30300240 PCT