Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1612 ATGAGTAGACCGAACACTCGAAGTAAAAATAAAAGGCTGAGACAAGGGGGTGATAGTGACAACACTTCTGAAATATGGAGGAAAATTCACAAAACCGGTGCAGTAACTGAAGATGATATGAATCAGCTTTATATGATTTGGAAGCCGGTCTGTTCTGGTTGTCGTGTCAATGCTAAAGACAACCCGAATTGCTTCTGTGCATTGGTTCCACCTCCAAATGGAACCCGGAAGACTGGCTTGTGGATAAAGTTGTCAGATTTTGTTGAAAATCTTGGCCCTGACCCAACTATGGATCTTCGCGCTTCTCCTGATTCACCTGCTGGTCTGACGAATCTTGGTGCAACATGCTATGCAAACAGTATACTTCAGTGCTTGTACATGCATAAATCTTTCCGAGAAGGCCTATTTTCTGTTGAACCAGATGTTTTGCAACAACAGCCGGTGTTGGATCAGCTGGCTCGGCTTTTTGTACAGTTGCACGTTAGTAAAAGGGCTTTCATAGATTCATCCCCCTTTGTAAAAACACTGGAGTTAGATGATGGAGTTCAGCAGGATAGCCATGAGTTCCTGACATTGCTTTTGTCATTGCTGGAACGTTGCCTGAGCCATTCCAAAATTGCCAAGGCAAGAACAATAGTTCAAGATCTTTTCCGTGGAAGTGTGTCTCATGTGACAACGTGTTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAATGGAAGACTTCTATGAGTTGGAGTTAAACGTCAAGGGATTGAAAAGTTTAGATGAGAGCCTAGATGATTACCTCAATATTGAAGAGCTTCATGGAGACAACCAATATTTTTGTGATTCATGTGGAACTAGAGTTGATGCTACTCGTAGCATCAAGCTCTGCACATTGCCTGAAGTACTTAATTTTCAACTTAAACGTTATGTCTTCCTTCCAAAGACTACAACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGCTGAACTTGATATGCGCAATAGATTGTCTGAGCTGTCCCATTTTGATTTGAGATATGACTTGTCGGCAGTATTGATTCACAAGGGAACTGCAGCTAATAGTGGTCACTACATTGCTCATATTAAGGATGAAAATACTGGGCAATGGTGGGAATTTGATGATGAGCATGTCACTAACTTGGGTCATCATCCCTTTGGTCAAGAAGTTTCAAGTTCTACTTCTAAATCTGTTAAGAATGATGTAGCTCATTCTAATTGCTCTGAAGCAAGGATAGCTGATAGTAATGGAAATGGTTTAAATGTTAAACCTTCTCAATCTTTGCATGTGGAAACATTTTCATCTAGTGATGCATACATGTTGATGTACCATCTTAAACATACCAAAAATGCTGGTGGAAAAGCGAGCATGGTTTGTGATGCTAACCATAAAGAAAAAGAGAGTGATGCAGTTACTACACAAGATAGTGCTTGTCTTCCTTCTCATCTTTGTGAAGAGATTCAAAATCTCAATGCCTCATATCTTGAAGCTTGTGAGCAGTACAAGCATAAGAAAGAGTTAGAATTGAGTCGTATCAATGAGAGGAGACAAGAAGTGCGATCTATTTTAGCTGAAGCTCCTGTTCAGCCACTAGAGCAAACATTTTTTTGGATTTATAGTGACTGGCTTCGCCAGTGGGCTGACAACATCATTCCAACTGCTCTTGACAATACATCAATCCAATGTTCACATGGGAAAGTCCCAGTATCAAAGATTACCTCAATGAAGAGATTGTCTTCTAAAGCATGGGATAAGATAATCTCTAAGTATAGTGGGGGGCCAACACTTTCTCATGATGATCACTGTTGGGATTGTCTGATTGATGGTGCTCAAAATGTGGTGTCAGCTGATACCTATCGGGATCGAAGGGAATCATTGAAGCAACTTGCACGGGATGTTCTGGACGGAAACTGTGAAGATGGAAAGTACTACGTGTCCAGACCATGGTTACAGCAATGGTGGAAAAGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGTTGGACCAACAGCCGCCATTAGCTGTCCACATGGGCAACTTATGCCTGAGCAAGCTGCTGGTGCTAAGCGGGTGCTTGTTCCTGAGGACTTCTGGATATTCTTATATGAAGATGCTATCTCTATAAAACCTGATGATCATCTGGGTTGCCCTACTTTCCCTTTAGACTCAAGAGAGTGTTCCCAATGCAGTAATGAAATATCTGAAGTGGCCAATTTGGAGGACTCTTTGAGATTAGTGAAACAAATGCAACGTCAGAAACATGAGAAACTATTCCTGGGTAAAAATATGCCGCTCTCTCTGCATTGCAAGTATTTCTTAGTTCCATCTTCGTGGATTTCAAAATGGAGAAATTACATTAATCCATCTGTAAAGAATTCAGATAAACCTGAAACATTAGAGGGGATAATTGATTCACTGAAGTGTGAAAAGCACTCACAACTCATTGAAAGGCCTCCTGAACTGGTGTTTAGACGCAGTGCTATAGTCCCAAGAGAGTCTTCTGCAGGTGGCTTAACCATAATATCTGAGAATGACTGGAAACACTTATGTGAAGAATGGGGTGGTATTGAGACCAAAGGAATATCTGCAAGAATTGAAAATATTAATGATCTGGAGAATGTTTTGACTGGATCATGTGAAGAGATGCCAATATGTGAGGATCAGTCGGCCAATTTGGACAAAGTCAATAATGAAGGTGGGAATGGACAAATTGTGATCAAGACTTGTCCAGAGGTTTGTGAAAGTTGCATTGGAGAAAGAGAAAGCTGTGAGTTGATGCAGAAACTTAACTATTGCAATGAGAACATAACCGTAATTCTTGTCCGTGGAAAGGAGGTCCCCAGATCAATCTTGGAGGCTTCAAAGGGTTTTGTTGAAACAGATCGGCGGGTTTCCAAACGCTCCCGCAAAACTAAAAGTGGGAGTTCTGTTAGCCTTAAAGTTTCTGCTTCGACATCGTTATACCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTGTCAAGGAAAACCAGATACTACAAAAAGGCAATAAAACAATTGATATTGATGATGAATATGCTACGCTGGTGGATGTGAACATATTTGCTGGAGATCAGATTATAGTGAGGGACTCAGAGATCCATGAAAATCGAGATATTGCTGATGAGCTTTATGACGAGAAAATGGATGCACAGCTTACTGAGGAAGGGTTCCGTGGAACACTTTTGACGTCCAATGTTTCATCACAAGTTGTTTAG 3252 0.4084 MSRPNTRSKNKRLRQGGDSDNTSEIWRKIHKTGAVTEDDMNQLYMIWKPVCSGCRVNAKDNPNCFCALVPPPNGTRKTGLWIKLSDFVENLGPDPTMDLRASPDSPAGLTNLGATCYANSILQCLYMHKSFREGLFSVEPDVLQQQPVLDQLARLFVQLHVSKRAFIDSSPFVKTLELDDGVQQDSHEFLTLLLSLLERCLSHSKIAKARTIVQDLFRGSVSHVTTCSQCGRDSEASSKMEDFYELELNVKGLKSLDESLDDYLNIEELHGDNQYFCDSCGTRVDATRSIKLCTLPEVLNFQLKRYVFLPKTTTKKKITSAFSFPAELDMRNRLSELSHFDLRYDLSAVLIHKGTAANSGHYIAHIKDENTGQWWEFDDEHVTNLGHHPFGQEVSSSTSKSVKNDVAHSNCSEARIADSNGNGLNVKPSQSLHVETFSSSDAYMLMYHLKHTKNAGGKASMVCDANHKEKESDAVTTQDSACLPSHLCEEIQNLNASYLEACEQYKHKKELELSRINERRQEVRSILAEAPVQPLEQTFFWIYSDWLRQWADNIIPTALDNTSIQCSHGKVPVSKITSMKRLSSKAWDKIISKYSGGPTLSHDDHCWDCLIDGAQNVVSADTYRDRRESLKQLARDVLDGNCEDGKYYVSRPWLQQWWKRKVLDAPSEADVGPTAAISCPHGQLMPEQAAGAKRVLVPEDFWIFLYEDAISIKPDDHLGCPTFPLDSRECSQCSNEISEVANLEDSLRLVKQMQRQKHEKLFLGKNMPLSLHCKYFLVPSSWISKWRNYINPSVKNSDKPETLEGIIDSLKCEKHSQLIERPPELVFRRSAIVPRESSAGGLTIISENDWKHLCEEWGGIETKGISARIENINDLENVLTGSCEEMPICEDQSANLDKVNNEGGNGQIVIKTCPEVCESCIGERESCELMQKLNYCNENITVILVRGKEVPRSILEASKGFVETDRRVSKRSRKTKSGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILQKGNKTIDIDDEYATLVDVNIFAGDQIIVRDSEIHENRDIADELYDEKMDAQLTEEGFRGTLLTSNVSSQVV* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1612 1083 MobiDBLite consensus disorder prediction 1 25 - -
Dod08g1612 1083 SUPERFAMILY Ubiquitin-like 976 1042 IPR029071 -
Dod08g1612 1083 ProSiteProfiles DUSP domain profile. 749 869 IPR006615 GO:0004843
Dod08g1612 1083 Gene3D Cysteine proteinases 95 450 - -
Dod08g1612 1083 Gene3D - 745 866 IPR035927 -
Dod08g1612 1083 Gene3D - 972 1043 - -
Dod08g1612 1083 ProSiteProfiles DUSP domain profile. 514 606 IPR006615 GO:0004843
Dod08g1612 1083 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Dod08g1612 1083 Pfam Ubiquitin carboxyl-terminal hydrolase 108 447 IPR001394 GO:0004843|GO:0016579
Dod08g1612 1083 CDD Ubl_USP48 973 1076 IPR044743 GO:0004197|GO:0004843|GO:0016579
Dod08g1612 1083 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1053 - -
Dod08g1612 1083 SMART dusp 532 603 IPR006615 GO:0004843
Dod08g1612 1083 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1053 - -
Dod08g1612 1083 SUPERFAMILY DUSP-like 517 606 IPR035927 -
Dod08g1612 1083 MobiDBLite consensus disorder prediction 11 25 - -
Dod08g1612 1083 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Dod08g1612 1083 CDD Peptidase_C19L 108 447 IPR033841 GO:0004843
Dod08g1612 1083 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 450 IPR028889 -
Dod08g1612 1083 ProSiteProfiles DUSP domain profile. 621 728 IPR006615 GO:0004843
Dod08g1612 1083 SUPERFAMILY Cysteine proteinases 106 451 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1612 Dod-Chr8 37684176 37697892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod08g1612 105 385 Miscellaneous Gene Families AT4G31670 31.126 7.05e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1612 - K11858 gmx:100795556 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1612 08 37684176 37697892 Dod09g0996 09 30291845 30300240 PCT