Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0967 ATGCTCAAGCAATTCCTCAGCAAGCTCCCTCGGAACAAGAAGCCCGATTCGGACGAGTCGACCCGGGTCGACTCGTCATCTCACCTTAGCTCCTCCTCCGCCAGTCACGATTCCCCACGCGCCGCCACCTCCGGAAAAAACCACCGGTCCCACGCCGGCGGCAACAGCTCCTCCGCTAAACGTACTTCCTCTGTTTTCCCTGCCAGCACCGTTTCTGCTATCGAGCCTTTGATCCCTTTCAAGGACGTTCCTAACACCGAGAAGATGAACCTCTTCGTTAGCAAATTGAGCCTCTGTTCTGTCACCTTCGATTTCACCGACCCAGGTAAGAACACGATGGAAAAAGAAGTGAAAAGGAGAACTTTGGTTGAGCTTGTTGATTTTGTTGCTTCCGGTTCTGTTAAATTCAGTGAGCCTGCTATTCTCGCCATGTGTAAAATGTGTGCAATTAACCTGTTCCGTGTTTTCCCGCCAAATTACCGGTCCAACCGGTTTCCGGTCAGCGGTGGTGGCGGCAGCGGTGGTGGTGAGAATGATGATGACGAGCCAGCTTTTGATCCTTCTTGGCCACATTTGATGATTGTGTATGATTTGCTGCTTAGGTTTGTTAGTTCTCCTAGTCTTGATGCCAAGGTGGCAAAGAAGTACATTGACCATACTTTTATTTTGAAGCTGATAGAGTTGTTTGATTCGGAGGATCCTAGGGAGAGGGATTGTTTGAAGACCATTCTTCATAGGGTTTATGGGAAGTTCATGGTGCATAGGCCTTACATAAGGAAGTCCCTTAACAATGTGTTTTATAGGTTTGTGTTTGAGACTGAGAGGCACAATGGGATTGCTGAGTTGTTGGAGATGTTTGGCAGCATAATTACTGGTTTTGCCTTGCCGTTGAAGGAGGAGCATAAGATCTTCTTGTGGAGGGTTTTGATCCCCCTGCACAAGCCCAAATCCATAGGGGTGTACTACCAGCAACTGTCGTATTGCGTCACGCAGTTTATCGAGAAGGAGCCGAAGTTGGCGAGCACTGTGATAAGGGGTTTGTTAAAGTATTGGCCGATAACGAATTGTCAGAAGGAGGTGATGTTCCTTGGGGAACTAGAAGAAATTTTGGAAGTGATTAGCATGGTAGAGTTCCAGAGGGTCATGGTCCCATTGTTTTGGCGGATTGGATGCTGCATTAACAGCATGCACTTTCAGGTGGCTGAAAGAGCCCTTTTCTTATGGAACAACGACCACATTGTCAACTTGATCGCCCACAACCGTCAGATGATACTGCCTATCATATTTCCAGCTTTAGATAGGAATTGTCAAGGCCACTGGAACCAGGCAGTGCTCAACTTTACTCATAATATTAGAAAGATGTTCATGGAGATGGATGAGAAACTGTTCCTGTCTTGTCTTTCTCAGTTTAAGGAGGAAGAAGCAATGCTAAATTCTGAAGCCGAGAAGCGCAAGGAAGCCTGGGAACGGCTAGAGAAAGCAGCCAGTCTCCAGCCAGTAATAGGAAACACCGCTGTCTTAGTTTCTCCAATTTGA 1536 0.4727 MLKQFLSKLPRNKKPDSDESTRVDSSSHLSSSSASHDSPRAATSGKNHRSHAGGNSSSAKRTSSVFPASTVSAIEPLIPFKDVPNTEKMNLFVSKLSLCSVTFDFTDPGKNTMEKEVKRRTLVELVDFVASGSVKFSEPAILAMCKMCAINLFRVFPPNYRSNRFPVSGGGGSGGGENDDDEPAFDPSWPHLMIVYDLLLRFVSSPSLDAKVAKKYIDHTFILKLIELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSLNNVFYRFVFETERHNGIAELLEMFGSIITGFALPLKEEHKIFLWRVLIPLHKPKSIGVYYQQLSYCVTQFIEKEPKLASTVIRGLLKYWPITNCQKEVMFLGELEEILEVISMVEFQRVMVPLFWRIGCCINSMHFQVAERALFLWNNDHIVNLIAHNRQMILPIIFPALDRNCQGHWNQAVLNFTHNIRKMFMEMDEKLFLSCLSQFKEEEAMLNSEAEKRKEAWERLEKAASLQPVIGNTAVLVSPI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0967 511 Gene3D - 84 494 IPR011989 -
Dod09g0967 511 MobiDBLite consensus disorder prediction 48 63 - -
Dod09g0967 511 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 79 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod09g0967 511 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 509 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod09g0967 511 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 509 - -
Dod09g0967 511 MobiDBLite consensus disorder prediction 9 23 - -
Dod09g0967 511 MobiDBLite consensus disorder prediction 1 63 - -
Dod09g0967 511 MobiDBLite consensus disorder prediction 24 41 - -
Dod09g0967 511 SUPERFAMILY ARM repeat 90 490 IPR016024 -
Dod09g0967 511 PIRSF PP2A_B56 3 508 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0967 Dod-Chr9 29916656 29919670 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0967 K11584 - gmx:100775273 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1638 08 38570328 38573071 Dod09g0967 09 29916656 29919670 PCT