Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod08g1638 ATGTTTAAGCATTTTCTCCGCAGACTCCCTCGGAAATCGTCGAGGCCCGACTCGGACGTGTCGCCTCGTAGGGGCGGCGACTCATCGCGTTCCACCGTTTCGCCACGCGCCGCGGGGAGGAGCAACCGGCCCCACGGCGGCGGTTCAAATGCGCGAGCCAACGCGGCGAAACGAGCCTCCTCCTCGGCGGTTTTTCCGGCCAGCATGGTGGCTGGGATTGAACCTTTGGTGCCCTTCAAGGATGTTCCAAATTCTGAGAAGATGAACCTTTTTGTGAGCAAATTGAGCCTTTGTTGTGTCACGTTTGATTTCACTGACCCTGGTAAGGACACGGTGGCAAAAGATGTGAAAAGAAGGACCTTGATTGAACTTGTTGATTTTGTGGCTTATGGGTCTACGAAATTTAGTGAACCTGCTATCCTTGCTATGTGTAGAATGTGCGCTATTAATTTGTTTAGAGTTTTCCCACCTAATTTTAGGGCTAATGGTGTTGGTGAGAATTTTGATGATGATCCTATGTTTGATCCTGCTTGGCCACATTTGCAAATTGTGTATGAGTTGCTTCTTAAGTTTATCACTTCTTCGAGCCTCGATGCCAAGGTGGCGAAGAAGTATATCGATCATTCATTTATTTCCATGTTGCTTGAATTGTTCGATTCGGAGGATCCCAGGGAAAGAGACTGCTTGAAGGCGATTCTGCATAGGATCTATGGGAAATTCATGGTGCATAGACCCTATATTCGAAAATCTTTTAACAATATATTTTATCGGTTTGTGTTTGAGACTGAGAGGCATAATGGGATTGCTGAGTTGTTGGAGATTTTCGGGAGCGTGGTTACTGGGTTTGCTTTGCCCTTGAAAGAGGAGCACAAAATCTTCTTGTGGAGGGTTTTGGTCCCCATGCACAAGCCAAAATCTTTGGGGGTCTACTTTCAGCAATTGGCCTACTGTGTTATGCAGTTTGTAGAGAAGGAGCCGAAGCTAGCAAGCGTTGTGATAAGGGGTTTGTTAAAATATTGGCCGGTAACAAATAGTCAGAAAGAGGTGATGTTCCTGGGTGAACTGGAAGAAATCTTGGAAACAATTAATATGGTAGAGTTCCAGAAAGTCATGGTCCCATTGTTTTGGCGGATTGGATGCTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTCTTCTTATGGAACAATGACCACATTGTCAACTTAATTGCTCATAACCGCCAAGTGATCCTGCCCATCATTTTTCCAGCTTTAGATAGGAATGCCCAAAGCCACTGGAACCTGGCAGTCGTCAACTTAACTCATAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTTTTCCTTTCTTGTCATGCTCATTTCAAGGAGGAAGAAGCAATTTTAAGCTCGGAGGCTGAGAAGCGGAAGGAAGCGTGGAAACGACTAGAGCATGCGGCCAGTCTCAAGCCAGTGATTGGAAACACAGCTGTTCTGGTGTCTCCTTTGATGACCTGA 1509 0.4592 MFKHFLRRLPRKSSRPDSDVSPRRGGDSSRSTVSPRAAGRSNRPHGGGSNARANAAKRASSSAVFPASMVAGIEPLVPFKDVPNSEKMNLFVSKLSLCCVTFDFTDPGKDTVAKDVKRRTLIELVDFVAYGSTKFSEPAILAMCRMCAINLFRVFPPNFRANGVGENFDDDPMFDPAWPHLQIVYELLLKFITSSSLDAKVAKKYIDHSFISMLLELFDSEDPRERDCLKAILHRIYGKFMVHRPYIRKSFNNIFYRFVFETERHNGIAELLEIFGSVVTGFALPLKEEHKIFLWRVLVPMHKPKSLGVYFQQLAYCVMQFVEKEPKLASVVIRGLLKYWPVTNSQKEVMFLGELEEILETINMVEFQKVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALDRNAQSHWNLAVVNLTHNIRKMFLEMDEKLFLSCHAHFKEEEAILSSEAEKRKEAWKRLEHAASLKPVIGNTAVLVSPLMT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod08g1638 502 Gene3D - 83 483 IPR011989 -
Dod08g1638 502 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod08g1638 502 SUPERFAMILY ARM repeat 89 480 IPR016024 -
Dod08g1638 502 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 498 - -
Dod08g1638 502 PIRSF PP2A_B56 7 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
Dod08g1638 502 MobiDBLite consensus disorder prediction 1 55 - -
Dod08g1638 502 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 78 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod08g1638 Dod-Chr8 38570328 38573071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod08g1638 K11584 - gmx:100781390 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1638 08 38570328 38573071 Dod08g1638 08 38570328 38573071 ECH
Dod08g1638 08 38570328 38573071 Dod09g0967 09 29916656 29919670 PCT