Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0908 ATGCTTCTAAGCAATATTTCTAAGAATGAAATCTGCAGCAATGGAAGCACTGGAAATGAAAATGAGTCTGGTGACAAGGAGGGGGATGATCAGGAATTTGGAGATGAAGGACACCTCTCCCGAAGCTTGGAAGGAAAGAAGGCAACTGATATTAGACTTGCAGCCATTTCTGTGGGGACATCATACCGAGGAGGATTGGGTAAGCTTTCAATTCGTGGAAACAATTCAGACCGTGGGGTGACTAAGTTGGGTCTCAAGGCAATTGCTCGTGGATGCCCTTCTCTGAAGGCTTTCTCTCTATGGAATGTTGCCACTATTGGTGATGAAGGCCTTATTGAGATTGCCCGTGGGTGTCACAAGTTAGAGAAGCTTGACCTCTGTAAGTGCCCTACAATTTCTGACAAGGCTTTGATTGAAGTTGCGAAGAACTGCCCAAATCTGTCTGATTTATCAATTGAGTCATGTCCTAAAATTGGTAATGAAGGTCTACAGGCTATTGGAAAGTGGTGTCCCAATCTAAGGTCGATATCAATCAAGGATTGCACAGGAGTTGGTGATCAGGGAATTGCTGGCTTGTTATCTTCAGCTTCCTTTGTTTTGACAAAGGTGAAGCTTGAGTCGCTGACTGTTTCCGATCTCTCCTTAGCTGTTATTGGGCATTATGGCTTCTCAGTTACCGATCTTGTCCTTAATTGCCTCCCAAATGTCAGCGAGAAAGGTTTCTGGGTTATGGGTAATGGTCGTGGATTGCAGAAACTTACATCAGTCACAATTGGTTCCTGCCGTGGACTGACAGATATTGGGCTTGAAGCTATTGGAAAGGGTTGTCCAAATGTGAAAAACTTCCAGCTCAGTAAGTGTGCATTTCTGTCAGATAATGGATTGGTTTCACTAACCAAGGCTGCTGTATCAATTGAGACCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTTGGCATCCTTTTCAACTGTGGTGCAAAATTGAAGGTTCTTACTTTGATTAGCTGCTATGGGATTAAAGATCTGAACTTGGGATTGCCAGCTGTATCTCCTTGTGAATCACTTTCCTCTTTATCAATCCGCGACTGTCCTGGATTTGGCGATGCTACCCTTGCTGTGCTGGGGAAGCTGTGTCCTCGTCTTAAGAATGTTGAATTGAGTGGACTCGCTGGCATAACTGACACAGGGTTTCTTCCGCTGCTTGAGAGCGCTGAGGCCGGTCTGGTTAAAGTCAATCTCAGTGGTTGCATAAATCTTACAGACAAAGTAGTTTTATCATTGGCCAATTTGCATGAGTTGACACTCGAGGTGCTTAACCTTGAAGGTTGCAAAAGAATCAGGTGA 1356 0.4425 MLLSNISKNEICSNGSTGNENESGDKEGDDQEFGDEGHLSRSLEGKKATDIRLAAISVGTSYRGGLGKLSIRGNNSDRGVTKLGLKAIARGCPSLKAFSLWNVATIGDEGLIEIARGCHKLEKLDLCKCPTISDKALIEVAKNCPNLSDLSIESCPKIGNEGLQAIGKWCPNLRSISIKDCTGVGDQGIAGLLSSASFVLTKVKLESLTVSDLSLAVIGHYGFSVTDLVLNCLPNVSEKGFWVMGNGRGLQKLTSVTIGSCRGLTDIGLEAIGKGCPNVKNFQLSKCAFLSDNGLVSLTKAAVSIETLQLEECHRITQFGFFGILFNCGAKLKVLTLISCYGIKDLNLGLPAVSPCESLSSLSIRDCPGFGDATLAVLGKLCPRLKNVELSGLAGITDTGFLPLLESAEAGLVKVNLSGCINLTDKVVLSLANLHELTLEVLNLEGCKRIR* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0908 451 Pfam Leucine Rich repeat 143 166 IPR001611 GO:0005515
Dod09g0908 451 Gene3D Ribonuclease Inhibitor 66 142 IPR032675 -
Dod09g0908 451 SMART LRR_CC_2 92 117 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 118 143 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 276 301 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 302 327 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 170 195 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 144 169 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 409 434 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 382 407 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 356 381 IPR006553 -
Dod09g0908 451 SMART LRR_CC_2 250 275 IPR006553 -
Dod09g0908 451 SUPERFAMILY RNI-like 68 443 - -
Dod09g0908 451 MobiDBLite consensus disorder prediction 1 21 - -
Dod09g0908 451 Gene3D Ribonuclease Inhibitor 143 346 IPR032675 -
Dod09g0908 451 PANTHER UNCHARACTERIZED 1 450 - -
Dod09g0908 451 MobiDBLite consensus disorder prediction 1 43 - -
Dod09g0908 451 Gene3D Ribonuclease Inhibitor 349 451 IPR032675 -
Dod09g0908 451 PANTHER EIN3-BINDING F-BOX-LIKE PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0908 Dod-Chr9 28814070 28815425 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0908 K14515 - gmx:100805418 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1685 08 39898006 39901959 Dod09g0908 09 28814070 28815425 PCT