Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g0881 ATGGCTCCCAACAAACTCTATGCCACCGTTTTGGTGCTTTCTCTCATTGCTTACTCAACAGTCAGTGAGGCCAATTGCCCCCCACCACCAAAGGCAACTCCACCACCTACACCAAAGGCAACTCCACCACCAACACCAAAGGCAACACCTCCACCAACACCAATAGCAACTCCACCACCAACACCAAAGGCAACACCTCCACCAACCCCAAAAGCATGTCCACCTGCACCAGCACCACAAGAACAATGCCCCAAGGACACCCTAAAGCTAGGGGCTTGTGCTGACCTTTTGGGGCTTGTTAACATTATAATTGGGACTCCTCCTTCAAGCAAGTGTTGTGCATTGATCAAGGGTTTGGCTGATTTGGAGGCAGCACTTTGCCTGTGCACTGCAATTAAGGCCAACGTGCTAGGGATCAACTTGAACGTGCCCGTCACCCTCAGTTTGATCCTTAGTGCTTGTGAAAAAACTGTCCCTCCTGGTTTTCAATGTCCCTAG 498 0.506 MAPNKLYATVLVLSLIAYSTVSEANCPPPPKATPPPTPKATPPPTPKATPPPTPIATPPPTPKATPPPTPKACPPAPAPQEQCPKDTLKLGACADLLGLVNIIIGTPPSSKCCALIKGLADLEAALCLCTAIKANVLGINLNVPVTLSLILSACEKTVPPGFQCP* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g0881 165 Gene3D - 72 165 IPR036312 -
Dod09g0881 165 PRINTS Proline rich extensin signature 39 60 - -
Dod09g0881 165 PRINTS Proline rich extensin signature 64 80 - -
Dod09g0881 165 PRINTS Proline rich extensin signature 27 39 - -
Dod09g0881 165 PANTHER - 1 165 - -
Dod09g0881 165 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 86 165 IPR036312 -
Dod09g0881 165 PANTHER LIPID TRANSFER PROTEIN 1 165 - -
Dod09g0881 165 CDD HPS_like 82 164 IPR027923 -
Dod09g0881 165 MobiDBLite consensus disorder prediction 27 81 - -
Dod09g0881 165 Pfam Hydrophobic seed protein 83 165 IPR027923 -
Dod09g0881 165 SMART aai_6 83 164 IPR016140 -
Dod09g0881 165 MobiDBLite consensus disorder prediction 24 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g0881 Dod-Chr9 28420584 28421128 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g0881 83 165 Acyl Lipid Metabolism Gene Families AT4G22490 38.824 1.41e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g0881 - - gmx:100526941 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g0881 09 28420584 28421128 Dod09g0881 09 28420584 28421128 ECH
Dod08g1697 08 40396298 40396648 Dod09g0881 09 28420584 28421128 PCT